RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 C6orf89Q6UWU4 347 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 CREB3L2Q70SY1 520 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 MFSD8Q8NHS3 518 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 PTDSS2Q9BVG9 487 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 C1QTNF6Q9BXI9 259 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 FKRPQ9H9S5 495 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 RASD1Q9Y272 281 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 GMEB1Q9Y692 573 aa18.22■□□□□ 0.51
UBXN4-204ENST00000426921 CHD3Q12873 2000 aaKnown RBP18.22■□□□□ 0.51
UBXN4-204ENST00000426921 IGHV4-30-2A0A087WSY4 118 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 OR6C65A6NJZ3 312 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 TGDSO95455 350 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 TP53P04637 393 aaPredicted RBP18.21■□□□□ 0.51
UBXN4-204ENST00000426921 ETS2P15036 469 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 DSCR9P59020 149 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 EGR4Q05215 589 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 TMEM225Q6GV28 225 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 KLHL24Q6TFL4 600 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 EPHX4Q8IUS5 362 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 GOLGA6L1Q8N7Z2 621 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 MAL2Q969L2 176 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 ZNF317Q96PQ6 595 aaPredicted RBP18.21■□□□□ 0.51
UBXN4-204ENST00000426921 RHNO1Q9BSD3 238 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 C12orf10Q9HB07 376 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 TCF7L2Q9NQB0 619 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 SLC25A37Q9NYZ2 338 aa18.21■□□□□ 0.51
UBXN4-204ENST00000426921 ATRQ13535 2644 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 ELOA3DA6NLF2 546 aaPredicted RBP18.2■□□□□ 0.5
UBXN4-204ENST00000426921 AHSA1O95433 338 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 PAX7P23759 505 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 PRKAR1BP31321 381 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 SELENOPP49908 381 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 STX1BP61266 288 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 ELOA3BQ3SY89 546 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 HIKESHIQ53FT3 197 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 FUNDC1Q8IVP5 155 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 MSRB3Q8IXL7 192 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 ELOA3Q8NG57 546 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 OR1K1Q8NGR3 316 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 MDFIQ99750 246 aa18.2■□□□□ 0.5
UBXN4-204ENST00000426921 RSPO3Q9BXY4 272 aaPredicted RBP18.2■□□□□ 0.5
UBXN4-204ENST00000426921 ZNF587BE7ETH6 402 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 ATP6V1G2-DDX39BF2Z307 99 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 POLR3GO15318 223 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-204ENST00000426921 ARAFP10398 606 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 PNMTP11086 282 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 APOBEC3AP31941 199 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-204ENST00000426921 TBRG1Q3YBR2 411 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 AGBL2Q5U5Z8 902 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 BLOC1S3Q6QNY0 202 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 CLEC2AQ6UVW9 174 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 LSMEM1Q8N8F7 131 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 MAGEE2Q8TD90 523 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-204ENST00000426921 ALKBH3Q96Q83 286 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-204ENST00000426921 LINC00470Q9BZP3 86 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 SLC52A3Q9NQ40 469 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 TMEM45AQ9NWC5 275 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 RCE1Q9Y256 329 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 ATP23Q9Y6H3 246 aa18.19■□□□□ 0.5
UBXN4-204ENST00000426921 CUBNO60494 3623 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 ARPC4-TTLL3A0A0A6YYG9 625 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 HOXC5Q00444 222 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 LGALS3BPQ08380 585 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 RAB35Q15286 201 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 C5orf46Q6UWT4 87 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 LINGO2Q7L985 606 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 ANKK1Q8NFD2 765 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 KTI12Q96EK9 354 aaPredicted RBP18.18■□□□□ 0.5
UBXN4-204ENST00000426921 B3GAT1Q9P2W7 334 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 CRNNQ9UBG3 495 aaPredicted RBP18.18■□□□□ 0.5
UBXN4-204ENST00000426921 ALPK2Q86TB3 2170 aa18.18■□□□□ 0.5
UBXN4-204ENST00000426921 FBN1P35555 2871 aaKnown RBP18.18■□□□□ 0.5
UBXN4-204ENST00000426921 TRBV5-3A0A0A0MS03 114 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 IGHV1-18A0A0C4DH31 117 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 C5orf58C9J3I9 102 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 KRT33AO76009 404 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 ZNF432O94892 652 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 LGI1O95970 557 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 BMP4P12644 408 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 CDH2P19022 906 aaPredicted RBP18.17■□□□□ 0.5
UBXN4-204ENST00000426921 PPIBP23284 216 aaKnown RBP18.17■□□□□ 0.5
UBXN4-204ENST00000426921 IDH3AP50213 366 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 SH3BGRP55822 239 aaPredicted RBP18.17■□□□□ 0.5
UBXN4-204ENST00000426921 CHRNB3Q05901 458 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 LOXL1Q08397 574 aaPredicted RBP18.17■□□□□ 0.5
UBXN4-204ENST00000426921 SWI5Q1ZZU3 235 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 C3orf36Q3SXR2 165 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 GCNT6Q5T4J0 391 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 NIPAL3Q6P499 406 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 DHRS4L2Q6PKH6 230 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 C10orf111Q8N326 155 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 BCL2L2Q92843 193 aaPredicted RBP18.17■□□□□ 0.5
UBXN4-204ENST00000426921 SPDL1Q96EA4 605 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 SLC38A2Q96QD8 506 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 EBF4Q9BQW3 602 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 CCDC28BQ9BUN5 200 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 KATNB1Q9BVA0 655 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 NELFAQ9H3P2 528 aa18.17■□□□□ 0.5
UBXN4-204ENST00000426921 MOV10Q9HCE1 1003 aaKnown RBP18.17■□□□□ 0.5
UBXN4-204ENST00000426921 SLCO1B3Q9NPD5 702 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms