RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 CCT8L1PA6NM43 557 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 M0R3H8 397 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 SMPD2O60906 423 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 KRT34O76011 436 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 VAMP5O95183 116 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 AHSA1O95433 338 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 CD3EP07766 207 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 CD247P20963 164 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 LGALS3BPQ08380 585 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 NRF1Q16656 503 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 TRMT5Q32P41 509 aaKnown RBP16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 C9orf135Q5VTT2 229 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 FAM91A1Q658Y4 838 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 REP15Q6BDI9 236 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 TSPYL5Q86VY4 417 aaPredicted RBP16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 RBM45Q8IUH3 476 aaKnown RBP16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 BHLHE22Q8NFJ8 381 aaPredicted RBP16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 OR52N5Q8NH56 324 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 TAMM41Q96BW9 452 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 LRRC58Q96CX6 371 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 MUCL1Q96DR8 90 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 NGBQ9NPG2 151 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 KLHL14Q9P2G3 628 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 TESQ9UGI8 421 aaKnown RBP16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 RASD1Q9Y272 281 aa16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 RAI1Q7Z5J4 1906 aaPredicted RBP16.11■□□□□ 0.17
SMARCAL1-205ENST00000425815 SHISA9B4DS77 424 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 CLOCKO15516 846 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 LYPD3O95274 346 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 THY1P04216 161 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 C8BP07358 591 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 PAX1P15863 534 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 PCGF2P35227 344 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 MDH1P40925 334 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 SELENOPP49908 381 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 CDH12P55289 794 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 RGS8P57771 180 aaPredicted RBP16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 CYLC2Q14093 348 aaPredicted RBP16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 VMACQ2NL98 169 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 ZNF672Q499Z4 452 aaPredicted RBP16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 COQ5Q5HYK3 327 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 SHEQ5VZ18 495 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 LINC00114Q6XXX2 140 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 CCDC80Q76M96 950 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 LINGO2Q7L985 606 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 OR6T1Q8NGN1 323 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 C10orf82Q8WW14 230 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 SLC47A1Q96FL8 570 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 TMEM27Q9HBJ8 222 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 MED4Q9NPJ6 270 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 UPB1Q9UBR1 384 aa16.1■□□□□ 0.17
SMARCAL1-205ENST00000425815 MED13LQ71F56 2210 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 TRAV36DV7A0A075B6V5 113 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 MS4A18H0YCH9 400 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 OR2T1O43869 369 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 ZNF432O94892 652 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 SOD3P08294 240 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 DANCRP0C864 163 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 CBLP22681 906 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 MPGP29372 298 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 SLC25A3Q00325 362 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 MS4A18Q3C1V0 323 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 FAM69AQ5T7M9 428 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 NHLRC1Q6VVB1 395 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 SNX32Q86XE0 403 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 KBTBD8Q8NFY9 601 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 OR8J3Q8NGG0 315 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 PERPQ96FX8 193 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 SLC41A3Q96GZ6 507 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 BOD1Q96IK1 185 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 ZNF583Q96ND8 569 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 MCHR1Q99705 422 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 GSX2Q9BZM3 304 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 SLCO5A1Q9H2Y9 848 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 GSX1Q9H4S2 264 aaPredicted RBP16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 EVA1AQ9H8M9 152 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 SLC17A5Q9NRA2 495 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 ZNF701Q9NV72 531 aaPredicted RBP16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 ZFHX3Q15911 3703 aa16.09■□□□□ 0.17
SMARCAL1-205ENST00000425815 ROS1P08922 2347 aa16.08■□□□□ 0.17
SMARCAL1-205ENST00000425815 M0R082 166 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 OVOL3O00110 214 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 MRASO14807 208 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 FMO6PO60774 539 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 UPK3AO75631 287 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 NPPAP01160 153 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 BGLAPP02818 100 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 PTNP21246 168 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 GRPRP30550 384 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 PTH2RP49190 550 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 PGGHGQ32M88 737 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 HSP90B2PQ58FF3 399 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 Q5PR19 223 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 OR7E24Q6IFN5 339 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 C5orf46Q6UWT4 87 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 PRSS57Q6UWY2 283 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 WDR88Q6ZMY6 472 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 H1FNTQ75WM6 255 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 SSX8Q7RTT4 187 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms