RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RNF44Q7L0R7 432 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 SYS1Q8N2H4 156 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 GATSQ8NAP1 163 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 OR52B4Q8NGK2 314 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 DNAJA3Q96EY1 480 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 TCF7L1Q9HCS4 588 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 CHRNA9Q9UGM1 479 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 PRELID1Q9Y255 219 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 A0A1B0GTH9 108 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 CHURC1-FNTBB4DL54 471 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 PDCD5O14737 125 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 GSTZ1O43708 216 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 RLN1P04808 185 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 OR8G3PP0DMU2 310 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 SMIM10L1P0DMW3 83 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ACAA2P42765 397 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 AP3S2P59780 193 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 HTR4Q13639 388 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 FAM53BQ14153 422 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 CDONQ4KMG0 1287 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 TMEM31Q5JXX7 168 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 NHLRC1Q6VVB1 395 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 COQ8AQ8NI60 647 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 SLC25A38Q96DW6 304 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 SMIM10Q96HG1 83 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ADAD1Q96M93 576 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 STACQ99469 402 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 GFI1Q99684 422 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ZFYVE21Q9BQ24 234 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 C1QTNF7Q9BXJ2 289 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ACTR10Q9NZ32 417 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 KIF26AQ9ULI4 1882 aaPredicted RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 TMEM72A0PK05 275 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 G3V3Q6 166 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 GABARAPH6UMI1 98 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 HRKO00198 91 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 KCNJ13O60928 360 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 RDH16O75452 317 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 ECDO95905 644 aaPredicted RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 IGKV1D-16P01601 117 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 MAS1P04201 325 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 RRASP10301 218 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 SPI1P17947 270 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 POU3F2P20265 443 aaPredicted RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 CDK2P24941 298 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 CAPZA2P47755 286 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 CCR4P51679 360 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 UBE2MP61081 183 aaKnown RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 FHL1Q13642 323 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNHIT3Q15649 155 aaPredicted RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 HYAL4Q2M3T9 481 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 DEFB110Q30KQ9 67 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 SFRP5Q5T4F7 317 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 OTPQ5XKR4 325 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 OR5M10Q6IEU7 315 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 LEG1Q6P5S2 330 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 C3P1Q6ZMU1 363 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 SFTPA2Q8IWL1 248 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 CMIPQ8IY22 773 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 POMGNT2Q8NAT1 580 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 RBPMSQ93062 196 aaKnown RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 RELTQ969Z4 430 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 TM4SF19Q96DZ7 209 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 Q96M85 177 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 KXD1Q9BQD3 176 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 CCDC3Q9BQI4 270 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 PLA2G2FQ9BZM2 168 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 ZCCHC4Q9H5U6 513 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 TRPV4Q9HBA0 871 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 ANKRD10Q9NXR5 420 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 DNAJB12Q9NXW2 375 aaKnown RBP6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 SERTAD3Q9UJW9 196 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 IKZF2Q9UKS7 526 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 POMT2Q9UKY4 750 aa6.9□□□□□ -1.31
SMARCC1-202ENST00000425518 A0A087WV62 115 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 LINC01553A4QN01 128 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 AIPO00170 330 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ARPC5O15511 151 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ITGA10O75578 1167 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CBX7O95931 251 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 TMIGD3P0DMS9 266 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CXCL2P19875 107 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GDI1P31150 447 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PTGS2P35354 604 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 RPS27P42677 84 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 KIAA1024LP59773 190 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 MGAT2Q10469 447 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ERV3-1Q14264 604 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GPR18Q14330 331 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 MFSD13AQ14CX5 517 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ULK3Q6PHR2 472 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ALKAL2Q6UX46 152 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 NUDT18Q6ZVK8 323 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 TMPRSS12Q86WS5 348 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 NPEPL1Q8NDH3 523 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 OR14A16Q8NHC5 309 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms