RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 RAB3IPQ96QF0 476 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 VKORC1Q9BQB6 163 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TTYH2Q9BSA4 534 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FNDC11Q9BVV2 318 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SLC19A3Q9BZV2 496 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ARMC1Q9NVT9 282 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PAQR5Q9NXK6 330 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ALKBH4Q9NXW9 302 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 VNN3Q9NY84 501 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SELENONQ9NZV5 590 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF175Q9Y473 711 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 KIAA1549Q9HCM3 1950 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FLNCQ14315 2725 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TRGV8A0A0C4DH27 118 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TRBV4-1A0A0J9YWV2 114 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CLEC18AA5D8T8 446 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF814B7Z6K7 855 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LRRN3E7EW58 273 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 H0Y3Z8 333 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PYCARD-AS1I3L0S3 204 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SMAD9O15198 467 aaKnown RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR2T1O43869 369 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RAMP1O60894 148 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FKBP6O75344 327 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 KRT36O76013 467 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 AQP8O94778 261 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RCBTB2O95199 551 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 GADD45GO95257 159 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TFPIP10646 304 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PTNP21246 168 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FPR1P21462 350 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ENPP1P22413 925 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RRM2P31350 389 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 IFNA8P32881 189 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 IDUAP35475 653 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RPS5P46782 204 aaKnown RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CTBP2P56545 445 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 NUP107P57740 925 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR2B6P58173 313 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RPS3AP61247 264 aaKnown RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CSNK2A1P68400 391 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SLC35A1P78382 337 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PRKCDQ05655 676 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SRSF1Q07955 248 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PMPCAQ10713 525 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SF3B4Q15427 424 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 GUSBP1Q15486 140 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ABLIM2Q6H8Q1 611 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR2T5Q6IEZ7 315 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PODNL1Q6PEZ8 512 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PAQR6Q6TCH4 344 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CLEC18BQ6UXF7 455 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 B3GNT6Q6ZMB0 384 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 NCCRP1Q6ZVX7 275 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SLC46A3Q7Z3Q1 461 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CYP4Z1Q86W10 505 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C9orf106Q8NAJ2 232 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CLEC18CQ8NCF0 446 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR2T29Q8NH02 315 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PFN4Q8NHR9 129 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FNDC9Q8TBE3 224 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RNF128Q8TEB7 428 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ACOT11Q8WXI4 607 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ROBO4Q8WZ75 1007 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CPNE4Q96A23 557 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MOGAT1Q96PD6 335 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TRIB1Q96RU8 372 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C7orf69Q9H7B7 122 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RNF122Q9H9V4 155 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 NTN4Q9HB63 628 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TIGARQ9NQ88 270 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C20orf141Q9NUB4 165 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MEMO1Q9Y316 297 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FAM32AQ9Y421 112 aaKnown RBP6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TESMINQ9Y4I5 508 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LYVE1Q9Y5Y7 322 aa6.3□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TENM4Q6N022 2769 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ESPL1Q14674 2120 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 IGKV3D-15A0A087WSY6 115 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 IGHV3-15A0A0B4J1V0 119 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 A0A1B0GUH1 482 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LOC102725191A0A1B0GVB3 256 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 HTR3EA5X5Y0 456 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 WIPF3A6NGB9 483 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ERICH4A6NGS2 130 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SLC22A20A6NK97 555 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 AQP7P3A6NL99 342 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ENO4A6NNW6 628 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF716A6NP11 495 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MS4A18H0YCH9 400 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 H3BNX3 289 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 J3QKU1 62 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CCL21O00585 134 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LRRTM2O43300 516 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 KLF4O43474 513 aa6.29□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PIP5K1CO60331 668 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms