RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	CA13	Q8N1Q1	262 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR6C4	Q8NGE1	309 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	NANP	Q8TBE9	248 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	RSC1A1	Q92681	617 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZMYND19	Q96E35	227 aa	Predicted RBP	11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	POM121	Q96HA1	1249 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	SPACA7	Q96KW9	195 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	HCN3	Q9P1Z3	774 aa		11.94	□□□□□ -0.5
COL12A1-205	ENST00000425443	KIR2DS5	A0A0G2JLQ3	304 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443		A0A0G2JNG1	304 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	SLC9B1P1	A6NJY1	282 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	RIIAD1	A6NNX1	92 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	FAM171A2	A8MVW0	826 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	KIR2DS3	K7RE56	304 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	CYR61	O00622	381 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	LYPD3	O95274	346 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	AK1	P00568	194 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	ANKRD34C	P0C6C1	535 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	TMEM11	P17152	192 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	AHCY	P23526	432 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	PUDP	Q08623	228 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	KIR2DS5	Q14953	304 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	NDUFAF6	Q330K2	333 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	DBX2	Q6ZNG2	339 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	MEPCE	Q7L2J0	689 aa	Known RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	PRSS42	Q7Z5A4	293 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	PARG	Q86W56	976 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	SDR9C7	Q8NEX9	313 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR5J2	Q8NH18	312 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	RFT1	Q96AA3	541 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	TMEM68	Q96MH6	324 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	STAC	Q99469	402 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	MRPL15	Q9P015	296 aa	Known RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	RPS6KB2	Q9UBS0	482 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443		A0A0A6YYC8	382 aa	Predicted RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443		I3L1I5	382 aa	Predicted RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	TRIM3	O75382	744 aa	Predicted RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	ST6GAL1	P15907	406 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	PTBP1	P26599	531 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	CCR6	P51684	374 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF85	Q03923	595 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	OAF	Q86UD1	273 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	BEST4	Q8NFU0	473 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR4N2	Q8NGD1	307 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR52H1	Q8NGJ2	320 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR4K13	Q8NH42	304 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	ST8SIA4	Q92187	359 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	PGLYRP3	Q96LB9	341 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	GPR174	Q9BXC1	333 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	C1QTNF6	Q9BXI9	259 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	NKIRAS2	Q9NYR9	191 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	HS3ST3A1	Q9Y663	406 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	CTSB	P07858	339 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	MAOB	P27338	520 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	PGD	P52209	483 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	DGCR2	P98153	550 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	FOXK2	Q01167	660 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	FHL5	Q5TD97	284 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZCCHC12	Q6PEW1	402 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	LYPD4	Q6UWN0	246 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	LRRC28	Q86X40	367 aa	Predicted RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR8H3	Q8N146	312 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	SLC22A18AS	Q8N1D0	253 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	GPBAR1	Q8TDU6	330 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	CNOT9	Q92600	299 aa	Known RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	GCDH	Q92947	438 aa	Predicted RBP	11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	TNFRSF13C	Q96RJ3	184 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF416	Q9BWM5	594 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	JAM3	Q9BX67	310 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	TRIM36	Q9NQ86	728 aa		11.93	□□□□□ -0.5
COL12A1-205	ENST00000425443	IMPA2	O14732	288 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	SOX30	O94993	753 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	MAGEB1	P43366	347 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	PITPNB	P48739	271 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	NTRK2	Q16620	822 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	MANEA	Q5SRI9	462 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	CREB3L2	Q70SY1	520 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	FAM98A	Q8NCA5	519 aa	Known RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	ABHD4	Q8TB40	342 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	BRIX1	Q8TDN6	353 aa	Known RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	AHCYL2	Q96HN2	611 aa	Known RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	FAM60A	Q9NP50	221 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	PCDHB16	Q9NRJ7	776 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF222	Q9UK12	451 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	PRELID3B	Q9Y3B1	194 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR10H1	Q9Y4A9	318 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	HCRTR1	O43613	425 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	FZD7	O75084	574 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	PEPD	P12955	493 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	SNRPB	P14678	240 aa	Known RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	ATP12A	P54707	1039 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	RAB38	P57729	211 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	ERV3-1	Q14264	604 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	PRSS45	Q7RTY3	260 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF687	Q8N1G0	1237 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	METTL27	Q8N6F8	245 aa	Predicted RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZDHHC1	Q8WTX9	485 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	SCMH1	Q96GD3	660 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	TEAD3	Q99594	435 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms