RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NSRP1Q9H0G5 558 aaKnown RBP11.42□□□□□ -0.58
VRK3-203ENST00000424804 KLHL9Q9P2J3 617 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 CHST2Q9Y4C5 530 aa11.42□□□□□ -0.58
VRK3-203ENST00000424804 ZC3H12DA2A288 527 aaKnown RBP11.41□□□□□ -0.58
VRK3-203ENST00000424804 PRORSD1PA6NEY8 169 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 BBIP1A8MTZ0 92 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 FAAHO00519 579 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 TPST1O60507 370 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 CCDC22O60826 627 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 PTNP21246 168 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 PRKAR1BP31321 381 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 RGS8P57771 180 aaPredicted RBP11.41□□□□□ -0.58
VRK3-203ENST00000424804 GNGT1P63211 74 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 PPP2R2BQ00005 443 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 PPA1Q15181 289 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 ADRM1Q16186 407 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 TIMM23BQ5SRD1 257 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 NANOGP8Q6NSW7 305 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 SPATA21Q7Z572 469 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
VRK3-203ENST00000424804 PTOV1Q86YD1 416 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 OR52E4Q8NGH9 312 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 RCN3Q96D15 328 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 SH3GL1Q99961 368 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 PRR14Q9BWN1 585 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 NANOGQ9H9S0 305 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 GID8Q9NWU2 228 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 CISD1Q9NZ45 108 aaKnown RBP11.41□□□□□ -0.58
VRK3-203ENST00000424804 TMEM181Q9P2C4 612 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 HDGFL3Q9Y3E1 203 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 ARFGEF3Q5TH69 2177 aa11.41□□□□□ -0.58
VRK3-203ENST00000424804 OR5H1A6NKK0 313 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ELOA3DA6NLF2 546 aaPredicted RBP11.4□□□□□ -0.58
VRK3-203ENST00000424804 E7EQL1 145 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 M0QX08 132 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 PDLIM1O00151 329 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 AIM2O14862 343 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 PMS2P2O95744 297 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 IMPDH2P12268 514 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 FKBP2P26885 142 aaKnown RBP11.4□□□□□ -0.58
VRK3-203ENST00000424804 H3F3AP84243 136 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 DMTNQ08495 405 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 RBBP4Q09028 425 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 FAPQ12884 760 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 CEACAM7Q14002 265 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 VEZF1Q14119 521 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 OR7A5Q15622 319 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ETFDHQ16134 617 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ELOA3BQ3SY89 546 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 DHRS4L2Q6PKH6 230 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 COMTD1Q86VU5 262 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 CCDC103Q8IW40 242 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ZNF100Q8IYN0 542 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 WDR31Q8NA23 367 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ELOA3Q8NG57 546 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 SPATA3Q8NHX4 192 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 VANGL1Q8TAA9 524 aaPredicted RBP11.4□□□□□ -0.58
VRK3-203ENST00000424804 C3orf49Q96BT1 292 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 TRMT61AQ96FX7 289 aaKnown RBP11.4□□□□□ -0.58
VRK3-203ENST00000424804 NAA11Q9BSU3 229 aaPredicted RBP11.4□□□□□ -0.58
VRK3-203ENST00000424804 TAPBPLQ9BX59 468 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ADAM19Q9H013 955 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 KAT8Q9H7Z6 458 aaKnown RBP11.4□□□□□ -0.58
VRK3-203ENST00000424804 NGBQ9NPG2 151 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 ADPRHL2Q9NX46 363 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 SELENONQ9NZV5 590 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 SLC25A15Q9Y619 301 aa11.4□□□□□ -0.58
VRK3-203ENST00000424804 M0R3H8 397 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 ZNF208O43345 1280 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 CD5LO43866 347 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 GPRIN2O60269 458 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 IGHV3-9P01782 118 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 ITGA5P08648 1049 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 COX4I1P13073 169 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 GTF2E2P29084 291 aaKnown RBP11.39□□□□□ -0.59
VRK3-203ENST00000424804 LSP1P33241 339 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 PCGF2P35227 344 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 CLK1P49759 484 aaKnown RBP11.39□□□□□ -0.59
VRK3-203ENST00000424804 SLC16A1P53985 500 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 SLC35A1P78382 337 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 SPOCK1Q08629 439 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 STK11Q15831 433 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 VMACQ2NL98 169 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 COQ5Q5HYK3 327 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 INTS11Q5TA45 600 aaKnown RBP11.39□□□□□ -0.59
VRK3-203ENST00000424804 FBXW9Q5XUX1 488 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 B3GLCTQ6Y288 498 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 GALNT5Q7Z7M9 940 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 RANBP3LQ86VV4 465 aaPredicted RBP11.39□□□□□ -0.59
VRK3-203ENST00000424804 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 UBE2J2Q8N2K1 259 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 OR10H5Q8NGA6 315 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 PIGXQ8TBF5 258 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 SLC25A36Q96CQ1 311 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 MUS81Q96NY9 551 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 RSPO3Q9BXY4 272 aaPredicted RBP11.39□□□□□ -0.59
VRK3-203ENST00000424804 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 EMC3Q9P0I2 261 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 USP22Q9UPT9 525 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms