RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PHLDA2Q53GA4 152 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 EARS2Q5JPH6 523 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 RBM48Q5RL73 367 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 LPCAT4Q643R3 524 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CTRB2Q6GPI1 263 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 COX15Q7KZN9 410 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 APTXQ7Z2E3 356 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 UNC93AQ86WB7 457 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ENTHD1Q8IYW4 607 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 NOXO1Q8NFA2 376 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 OR5B17Q8NGF7 314 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 OR5L2Q8NGL0 311 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 OR6K2Q8NGY2 324 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 OR5AK3PQ8NH89 298 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 C8orf46Q8TAG6 207 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ACER1Q8TDN7 264 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM255BQ8WV15 326 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MYDGFQ969H8 173 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CIB1Q99828 191 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MICU1Q9BPX6 476 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ACTR3CQ9C0K3 210 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PORCNQ9H237 461 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ALG9Q9H6U8 611 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 HRASLSQ9HDD0 168 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 BATF3Q9NR55 127 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CUTCQ9NTM9 273 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 EXD2Q9NVH0 621 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 RMND1Q9NWS8 449 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 BABAM2Q9NXR7 383 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ELOVL5Q9NYP7 299 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 SIGLEC8Q9NYZ4 499 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MAT2BQ9NZL9 334 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 TUBGCP4Q9UGJ1 667 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ICAM5Q9UMF0 924 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PPP1R3CQ9UQK1 317 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PDE10AQ9Y233 779 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MRPS28Q9Y2Q9 187 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 AK6Q9Y3D8 172 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF337Q9Y3M9 751 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PDS5AQ29RF7 1337 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 WDR17Q8IZU2 1322 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MAPK8IP3Q9UPT6 1336 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 KIR2DS5A0A0G2JLQ3 304 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 GAGE12JA6NER3 117 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 E5RJQ4 531 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 LMO7DNF2Z398 122 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 KIR2DS3K7RE56 304 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 M0QXV9 152 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 DCTN6O00399 190 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RGS16O15492 202 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 P2RX6O15547 441 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MLNRO43193 412 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PFKFB2O60825 505 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ADAP1O75689 374 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 BCAR3O75815 825 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 GJB5O95377 273 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 FGF19O95750 216 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 TSPAN13O95857 204 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ACTL6AO96019 429 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CA1P00915 261 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 IFNA5P01569 189 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 IGHG4P01861 327 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 HBQ1P09105 142 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 NQO1P15559 274 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CHRNB2P17787 502 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 POLR2EP19388 210 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 DTYMKP23919 212 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PSMB5P28074 263 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MAP3K8P41279 467 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RANBP1P43487 201 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 GNPDA1P46926 289 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 QARSP47897 775 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PRELPP51888 382 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 NKX2-5P52952 324 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MLLT10P55197 1068 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 UBE2KP61086 200 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ERVK11-1P61568 191 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CCL7P80098 99 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MRPS22P82650 360 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CKAP4Q07065 602 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SRSF1Q07955 248 aaKnown RBP eCLIP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MGAT3Q09327 533 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RIPPLY1Q0D2K3 151 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PDIA2Q13087 525 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CTTNQ14247 550 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SPCS2Q15005 226 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 DAZAP2Q15038 168 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SF3B4Q15427 424 aaKnown RBP eCLIP3.22□□□□□ -1.891e-9■■□□□ 13.4
SF3B1-205ENST00000424674 SF3A2Q15428 464 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 TRIP6Q15654 476 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 INPP5JQ15735 1006 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RPEL1Q2QD12 228 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM249Q2WGJ8 235 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ASPRV1Q53RT3 343 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 DMRTC1Q5HYR2 192 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PPM1LQ5SGD2 360 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PXDC1Q5TGL8 231 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SPOPLQ6IQ16 392 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PRR5LQ6MZQ0 368 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 BTNL3Q6UXE8 466 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms