RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TMEM33P57088 247 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 FUT5Q11128 374 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 ATAD3BQ5T9A4 648 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 IL23RQ5VWK5 629 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 FAHD2BQ6P2I3 314 aaPredicted RBP14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 THSD4Q6ZMP0 1018 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 GPAT4Q86UL3 456 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 LSRQ86X29 649 aaPredicted RBP14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 C10orf107Q8IVU9 208 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 CMIPQ8IY22 773 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 CCDC63Q8NA47 563 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 FAHD2AQ96GK7 314 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 ALKBH3Q96Q83 286 aaPredicted RBP14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 TPK1Q9H3S4 243 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 MS4A5Q9H3V2 200 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 PRDM4Q9UKN5 801 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 CMAHPQ9Y471 501 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 TRAV20A0A0B4J274 112 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 RNF103-CHMP3A0A140T963 221 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 TMEM233B4DJY2 109 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 WNT9BO14905 357 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 SYNGR3O43761 229 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 TRIM13O60858 407 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 PNPP00491 289 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 AVPP01185 164 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 SAGP10523 405 aaPredicted RBP14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 ACHEP22303 614 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 LMO4P61968 165 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 DEFA6Q01524 100 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 OR7A5Q15622 319 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 GSTA3Q16772 222 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 EPHX4Q8IUS5 362 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 CLECL1Q8IZS7 167 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 RDH5Q92781 318 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 RAB8BQ92930 207 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 MRPL24Q96A35 216 aaKnown RBP14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 C1orf50Q9BV19 199 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 SUCNR1Q9BXA5 334 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 LPAR2Q9HBW0 351 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 G6PC2Q9NQR9 355 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 REV1Q9UBZ9 1251 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 PCDHGB1Q9Y5G3 927 aa14.41□□□□□ -0.1
CHCHD3-202ENST00000423635 PRAMEF27A3QJZ7 478 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 RNASET2O00584 256 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 HPXP02790 462 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 NR4A1P22736 598 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 CLDN8P56748 225 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 DAG1Q14118 895 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 NIPAL3Q6P499 406 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 HMGN2P46Q86SG4 172 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 ZDHHC22Q8N966 263 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 FNDC5Q8NAU1 212 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 C3orf30Q96M34 536 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 NOX3Q9HBY0 568 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 TREM2Q9NZC2 230 aa14.4□□□□□ -0.1
CHCHD3-202ENST00000423635 CHRNGP07510 517 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 ANPEPP15144 967 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 MRPS11P82912 194 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 ARF1P84077 181 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 ROR2Q01974 943 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 EPS8Q12929 822 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 FOXL1Q12952 345 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 SNTB2Q13425 540 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 PCLAFQ15004 111 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 PDCD2Q16342 344 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 MSMPQ1L6U9 139 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 REP15Q6BDI9 236 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 TNFAIP8L2Q6P589 184 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 CCDC36Q8IYA8 594 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 NOA1Q8NC60 698 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 MRPL37Q9BZE1 423 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 NARFLQ9H6Q4 476 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 ESM1Q9NQ30 184 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 SLC52A3Q9NQ40 469 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 RASD1Q9Y272 281 aa14.39□□□□□ -0.11
CHCHD3-202ENST00000423635 LOC105371242A0A075B767 164 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 A0A0G2JK05 382 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF503-AS2A6NEH8 195 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 CFAP73A6NFT4 308 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 AGAP5A6NIR3 686 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 M0R233 179 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 NPHS1O60500 1241 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 SCN2BO60939 215 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF432O94892 652 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 GSNP06396 782 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 G6PDP11413 515 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 UQCRC2P22695 453 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 CXCR1P25024 350 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 SAXO2Q658L1 398 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 OR4F3Q6IEY1 312 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 KRT80Q6KB66 452 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 C1QL2Q7Z5L3 287 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 RIBC1Q8N443 379 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 OR8J2Q8NGG1 315 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 TAPBPLQ9BX59 468 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 CRLF2Q9HC73 371 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms