RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 HIST1H2ACQ93077 130 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 MARVELD3Q96A59 401 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 MCUR1Q96AQ8 359 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 CCDC124Q96CT7 223 aaKnown RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 CLPTM1LQ96KA5 538 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 SPOCK3Q9BQ16 436 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 BTBD10Q9BSF8 475 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 ELOVL5Q9NYP7 299 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 ING1Q9UK53 422 aaPredicted RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 A4GNTQ9UNA3 340 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 RASD1Q9Y272 281 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 PTPN13Q12923 2485 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 IGKV3D-15A0A087WSY6 115 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 TUBAL3A6NHL2 446 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF716A6NP11 495 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 hCG_2039718K7EN88 272 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 M0R082 166 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 VAMP5O95183 116 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 OR6A2O95222 327 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 BGLAPP02818 100 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 THRBP10828 461 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 UMPSP11172 480 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 CD79BP40259 229 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 PEX19P40855 299 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 KIR2DL3P43628 341 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 RASSF2P50749 326 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 SLC16A1P53985 500 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 CBX1P83916 185 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 BNIP1Q12981 228 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 PMS2P3Q13401 168 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 C1DQ13901 141 aaKnown RBP13.99□□□□□ -0.17
BRAT1-202ENST00000421712 TRIM25Q14258 630 aaKnown RBP13.99□□□□□ -0.17
BRAT1-202ENST00000421712 SLC17A1Q14916 467 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 TRAM2Q15035 370 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 FXNQ16595 210 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 CASP12Q6UXS9 341 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 TFAP2EQ6VUC0 442 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 DMRTC2Q8IXT2 367 aaPredicted RBP13.99□□□□□ -0.17
BRAT1-202ENST00000421712 FAM86B1Q8N7N1 296 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 OR9K2Q8NGE7 335 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 OR6S1Q8NH40 331 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF417Q8TAU3 575 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 TMEM255BQ8WV15 326 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 TMEM239Q8WW34 195 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 LRGUKQ96M69 825 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 HS6ST2Q96MM7 605 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 MOGAT1Q96PD6 335 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF587Q96SQ5 575 aaPredicted RBP13.99□□□□□ -0.17
BRAT1-202ENST00000421712 PRSS27Q9BQR3 290 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 SF3B5Q9BWJ5 86 aaKnown RBP13.99□□□□□ -0.17
BRAT1-202ENST00000421712 ENKD1Q9H0I2 346 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 MUC13Q9H3R2 512 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 ACTR3BQ9P1U1 418 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 B3GALT5Q9Y2C3 310 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 MED31Q9Y3C7 131 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 CORINQ9Y5Q5 1042 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 ENPP4Q9Y6X5 453 aa13.99□□□□□ -0.17
BRAT1-202ENST00000421712 LRRN3E7EW58 273 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 C16orf97H3BN30 126 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 ATP5HO75947 161 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 MT-ATP6P00846 226 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF43P17038 809 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 ITGA2P17301 1181 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 AHCYP23526 432 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 RBM34P42696 430 aaKnown RBP13.98□□□□□ -0.17
BRAT1-202ENST00000421712 OR3A2P47893 321 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 LTBQ06643 244 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 RRM2BQ7LG56 351 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 AAED1Q7RTV5 226 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 PFN4Q8NHR9 129 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 LINC01560Q8TB33 94 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 APH1AQ96BI3 265 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 SLC7A6OSQ96CW6 309 aaPredicted RBP13.98□□□□□ -0.17
BRAT1-202ENST00000421712 OXGR1Q96P68 337 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 SLC19A3Q9BZV2 496 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 SLC24A3Q9HC58 644 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 NANSQ9NR45 359 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 PARPBPQ9NWS1 579 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 SEC14L4Q9UDX3 406 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 PRSS50Q9UI38 385 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 FLVCR1Q9Y5Y0 555 aa13.98□□□□□ -0.17
BRAT1-202ENST00000421712 UTP20O75691 2785 aaKnown RBP13.98□□□□□ -0.17
BRAT1-202ENST00000421712 PKDREJQ9NTG1 2253 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 ENO4A6NNW6 628 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-202ENST00000421712 DIRAS1O95057 198 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 ADAP00813 363 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 IGHV3-9P01782 118 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 MT-ND1P03886 318 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 RHCEP18577 417 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 ATP6V1B2P21281 511 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 P2RY4P51582 365 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 UGT2B15P54855 530 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 SORDQ00796 357 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 MS4A2Q01362 244 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF74Q16587 644 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 MTX3Q5HYI7 312 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF730Q6ZMV8 503 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 CREB3L2Q70SY1 520 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 OFCC1Q8IZS5 231 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms