RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 STK35Q8TDR2 534 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 PAQR8Q8TEZ7 354 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 PSMF1Q92530 271 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ZHX1-C8orf76Q96EF9 292 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 DNAJA3Q96EY1 480 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ZNF649Q9BS31 505 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 FAM117AQ9C073 453 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 OR11A1Q9GZK7 315 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 FBXL2Q9UKC9 423 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 VDAC3Q9Y277 283 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 RIIAD1A6NNX1 92 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 PRR23D1E9PI22 279 aaPredicted RBP18.96■□□□□ 0.63
GPC1-202ENST00000420138 SLC25A12O75746 678 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 SERPINA7P05543 415 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 PRR23D2P0DMB1 279 aaPredicted RBP18.96■□□□□ 0.63
GPC1-202ENST00000420138 CCL3P10147 92 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 CLUP10909 449 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 RPL4P36578 427 aaKnown RBP18.96■□□□□ 0.63
GPC1-202ENST00000420138 RGS6P49758 472 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 TUBA1BP68363 451 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 MED22Q15528 200 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 PLPPR5Q32ZL2 321 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 ANKDD1AQ495B1 522 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 B3GNTL1Q67FW5 361 aaPredicted RBP18.96■□□□□ 0.63
GPC1-202ENST00000420138 TUBA1AQ71U36 451 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 PROKR2Q8NFJ6 384 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 OR4F15Q8NGB8 312 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 OR52E2Q8NGJ4 325 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 OR4K13Q8NH42 304 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 POC1BQ8TC44 478 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 OTULINQ96BN8 352 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 KATNB1Q9BVA0 655 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 PALMDQ9NP74 551 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 SEC14L4Q9UDX3 406 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 IL17BQ9UHF5 180 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 ERGIC3Q9Y282 383 aa18.96■□□□□ 0.63
GPC1-202ENST00000420138 IRGMA1A4Y4 181 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 EFNA2O43921 213 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 HSMCR30P0CW71 290 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 ZNF3P17036 446 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 OPRL1P41146 370 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 APOBEC1P41238 236 aaKnown RBP18.95■□□□□ 0.62
GPC1-202ENST00000420138 ERVK-25P63136 954 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 RPL18Q07020 188 aaKnown RBP18.95■□□□□ 0.62
GPC1-202ENST00000420138 C1orf140Q5VVS0 124 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 DND1Q8IYX4 353 aaKnown RBP18.95■□□□□ 0.62
GPC1-202ENST00000420138 NKD1Q969G9 470 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 MGLLQ99685 303 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 ANGPTL4Q9BY76 406 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 TAS2R5Q9NYW4 299 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 H2AFY2Q9P0M6 372 aaPredicted RBP18.95■□□□□ 0.62
GPC1-202ENST00000420138 CEP250Q9BV73 2442 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 SHISA8B8ZZ34 492 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.95■□□□□ 0.62
GPC1-202ENST00000420138 MT-ATP6P00846 226 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 IGHA1P01876 353 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 LIMS3P0CW19 117 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 LIMS4P0CW20 117 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 CD82P27701 267 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 ATP1A4Q13733 1029 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 C11orf91Q3C1V1 193 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 ALG10Q5BKT4 473 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 FAM69AQ5T7M9 428 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 SIRT6Q8N6T7 355 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 NPEPL1Q8NDH3 523 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 SDR9C7Q8NEX9 313 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 TEAD3Q99594 435 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 RACGAP1Q9H0H5 632 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 DCSTAMPQ9H295 470 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 KLHL1Q9NR64 748 aa18.95■□□□□ 0.62
GPC1-202ENST00000420138 CDRT15L2A8MXV6 281 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 FTCDNL1E5RQL4 147 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 IMPA2O14732 288 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 IFNGP01579 166 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 CD14P08571 375 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 APEHP13798 732 aaKnown RBP18.94■□□□□ 0.62
GPC1-202ENST00000420138 IL11P20809 199 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.94■□□□□ 0.62
GPC1-202ENST00000420138 ZNF846Q147U1 533 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 SPHARQ15513 63 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 C16orf87Q6PH81 154 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 NANOGNBQ7Z5D8 188 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 DTX1Q86Y01 620 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 TMEM156Q8N614 296 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 FNDC8Q8TC99 324 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 ZPLD1Q8TCW7 415 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 S100ZQ8WXG8 99 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 RASD2Q96D21 266 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 OPALINQ96PE5 141 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 MND1Q9BWT6 205 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 KLHL21Q9UJP4 597 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 PMF1-BGLAPU3KQ54 211 aa18.94■□□□□ 0.62
GPC1-202ENST00000420138 PTPRZ1P23471 2315 aaPredicted RBP18.94■□□□□ 0.62
GPC1-202ENST00000420138 CLDN25C9JDP6 229 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 IDH3BO43837 385 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 F13BP05160 661 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 TGFBR1P36897 503 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 RSPO4Q2I0M5 234 aaPredicted RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 C19orf48Q6RUI8 117 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 USP43Q70EL4 1123 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms