RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RAD21L1Q9H4I0 556 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 BARX1Q9HBU1 254 aaPredicted RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 SLC17A5Q9NRA2 495 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 CBLN4Q9NTU7 201 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 FGFR1OP2Q9NVK5 253 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 GDF2Q9UK05 429 aaPredicted RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 POU2F3Q9UKI9 436 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 B3GALT5Q9Y2C3 310 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 AMDHD2Q9Y303 409 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 CHST2Q9Y4C5 530 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 CSPG4Q6UVK1 2322 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 ABCA2Q9BZC7 2435 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 A0A096LPI6 279 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 NPIPB7O75200 414 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 VAMP5O95183 116 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 PRG2P13727 222 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 MPGP29372 298 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 FABP6P51161 128 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 P2RY4P51582 365 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 SEC24CP53992 1094 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 STX1BP61266 288 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 SPOCK1Q08629 439 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 FADDQ13158 208 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 NRF1Q16656 503 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 C1QTNF12Q5T7M4 302 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 C1orf140Q5VVS0 124 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 SLC2A7Q6PXP3 512 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 DNM1P46Q6ZS02 220 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 AAED1Q7RTV5 226 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 ABHD12BQ7Z5M8 362 aaPredicted RBP8.27□□□□□ -1.09
NUP50-205ENST00000419387 SERPINA11Q86U17 422 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 GPAT4Q86UL3 456 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 PRIMA1Q86XR5 153 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 FBXL14Q8N1E6 418 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 MAPK1IP1LQ8NDC0 245 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 STK35Q8TDR2 534 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 SLC35B4Q969S0 331 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 C3orf49Q96BT1 292 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 BOD1Q96IK1 185 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 ADAD1Q96M93 576 aaKnown RBP8.27□□□□□ -1.09
NUP50-205ENST00000419387 BCL2L10Q9HD36 194 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 NPHS2Q9NP85 383 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 A4GALTQ9NPC4 353 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 TCF7L2Q9NQB0 619 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 ADPRHL2Q9NX46 363 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 NSD1Q96L73 2696 aaPredicted RBP8.27□□□□□ -1.09
NUP50-205ENST00000419387 HIVEP2P31629 2446 aa8.27□□□□□ -1.09
NUP50-205ENST00000419387 TMEM229AB2RXF0 380 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 C5orf58C9J3I9 102 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 POLR3GO15318 223 aaPredicted RBP8.26□□□□□ -1.09
NUP50-205ENST00000419387 FRS3O43559 492 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 SSX4O60224 188 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 WNT11O96014 354 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 BMP2P12643 396 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 HOXB9P17482 250 aaPredicted RBP8.26□□□□□ -1.09
NUP50-205ENST00000419387 PRPS1P60891 318 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 IRX1P78414 480 aaPredicted RBP8.26□□□□□ -1.09
NUP50-205ENST00000419387 SLC25A3Q00325 362 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 HOXC5Q00444 222 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 RAB35Q15286 201 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 C11orf71Q6IPW1 123 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 ZNF544Q6NX49 715 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 B3GLCTQ6Y288 498 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 CREB3L2Q70SY1 520 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 MUC15Q8N387 334 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 MFSD8Q8NHS3 518 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 BBS10Q8TAM1 723 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 MAL2Q969L2 176 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 SLC25A36Q96CQ1 311 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 RHNO1Q9BSD3 238 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 CACNG6Q9BXT2 260 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 FKRPQ9H9S5 495 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 TMEM45AQ9NWC5 275 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 SLAMF8Q9P0V8 285 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 RASD1Q9Y272 281 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 ATP23Q9Y6H3 246 aa8.26□□□□□ -1.09
NUP50-205ENST00000419387 OR6C65A6NJZ3 312 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 KIAA1324LA8MWY0 1029 aaPredicted RBP8.25□□□□□ -1.09
NUP50-205ENST00000419387 FTCDNL1E5RQL4 147 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 CRLF1O75462 422 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 KRT33AO76009 404 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 AHSA1O95433 338 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 TP53P04637 393 aaPredicted RBP8.25□□□□□ -1.09
NUP50-205ENST00000419387 ETS2P15036 469 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 CDH2P19022 906 aaPredicted RBP8.25□□□□□ -1.09
NUP50-205ENST00000419387 DRD4P21917 467 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 PPIBP23284 216 aaKnown RBP8.25□□□□□ -1.09
NUP50-205ENST00000419387 PAX7P23759 505 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 PRKAR1BP31321 381 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 APOBEC3AP31941 199 aaPredicted RBP8.25□□□□□ -1.09
NUP50-205ENST00000419387 LSP1P33241 339 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 SELENOPP49908 381 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 DSCR9P59020 149 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 EGR4Q05215 589 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 DMTNQ08495 405 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 HIKESHIQ53FT3 197 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 PAGE3Q5JUK9 113 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 LRIF1Q5T3J3 769 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 NIPAL3Q6P499 406 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms