RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GDPD1Q8N9F7 314 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 SIMC1Q8NDZ2 872 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 ZCWPW2A0A1B0GU75 182 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 WASH4PA8MWX3 477 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 SNNO75324 88 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-205ENST00000418258 SNRPD2P62316 118 aaKnown RBP10.43□□□□□ -0.74
PTCH1-205ENST00000418258 KEAP1Q14145 624 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 PAPD4Q6PIY7 484 aaKnown RBP10.43□□□□□ -0.74
PTCH1-205ENST00000418258 SLC35D2Q76EJ3 337 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 CCDC28AQ8IWP9 274 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 SIRT6Q8N6T7 355 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 OR13J1Q8NGT2 312 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 BSCL2Q96G97 398 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-205ENST00000418258 EVA1AQ9H8M9 152 aa10.43□□□□□ -0.74
PTCH1-205ENST00000418258 OLFM2O95897 454 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 P2RX1P51575 399 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 CXADRP78310 365 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 EDDM3AQ14507 147 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 MED25Q71SY5 747 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SYT13Q7L8C5 426 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 LCORQ96JN0 433 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 WWTR1Q9GZV5 400 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 WASH6PQ9NQA3 447 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SDR39U1Q9NRG7 319 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 NFYBP25208 207 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 VEGFCP49767 419 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 NKX6-1P78426 367 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 GPLD1P80108 840 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 HSF5Q4G112 596 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 MARCH8Q5T0T0 291 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 LMNTD1Q8N9Z9 388 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 CPEB3Q8NE35 698 aaKnown RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 OTOFQ9HC10 1997 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 GNB1P62873 340 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 MGAT3Q09327 533 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SLC46A3Q7Z3Q1 461 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 OR4F15Q8NGB8 312 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SECTM1Q8WVN6 248 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 ANKRD19PQ9H560 264 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 RPS10P5Q9NQ39 176 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 METTL15A6NJ78 407 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 B4GAT1O43505 415 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 PRICKLE3O43900 615 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 KCNK2O95069 426 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 HLCSP50747 726 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 AGFG1P52594 562 aaKnown RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 RAB40BQ12829 278 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 CATR1Q13166 79 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 ATPAF1Q5TC12 328 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 GDPD3Q7L5L3 318 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 OR8J2Q8NGG1 315 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 OR2T27Q8NH04 317 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 QRSL1Q9H0R6 528 aaKnown RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 MED20Q9H944 212 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 NUBP2Q9Y5Y2 271 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 J3KTA2 159 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SHEQ5VZ18 495 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 C17orf50Q8WW18 174 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 ANKRD9Q96BM1 317 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 THAP7Q9BT49 309 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 ZNF281Q9Y2X9 895 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 BRWD1Q9NSI6 2320 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 LINC01553A4QN01 128 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 CRYM-AS1A6NIL9 109 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 HLA-AP01891 365 aaKnown RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 PRKACBP22694 351 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 CST5P28325 142 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 PRKAR1BP31321 381 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 EIF1P41567 113 aaKnown RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 THBS3P49746 956 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 RNLSQ5VYX0 342 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 HRASLS5Q96KN8 279 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SELENOIQ9C0D9 397 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 C1GALT1Q9NS00 363 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 LANCL2Q9NS86 450 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 DOCK2Q92608 1830 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 H7C1C5 153 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 TPT1P13693 172 aaKnown RBP10.42□□□□□ -0.74
PTCH1-205ENST00000418258 NDUFB7P17568 137 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 HTR2BP41595 481 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 LCN6P62502 163 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 LTB4RQ15722 352 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SYPL1Q16563 259 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 PARM1Q6UWI2 310 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 TMEM64Q6YI46 380 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SLC35F3Q8IY50 421 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SUMF2Q8NBJ7 301 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SLC46A1Q96NT5 459 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 SUCNR1Q9BXA5 334 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 VAPAQ9P0L0 249 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 ATG4BQ9Y4P1 393 aa10.42□□□□□ -0.74
PTCH1-205ENST00000418258 FAM166BA8MTA8 275 aa10.41□□□□□ -0.74
PTCH1-205ENST00000418258 SOCS6O14544 535 aa10.41□□□□□ -0.74
PTCH1-205ENST00000418258 EIF1BO60739 113 aaKnown RBP10.41□□□□□ -0.74
PTCH1-205ENST00000418258 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
PTCH1-205ENST00000418258 IGHV3-9P01782 118 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms