RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 KLHL24Q6TFL4 600 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 HSDL2Q6YN16 418 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 VASH2Q86V25 355 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 PTOV1Q86YD1 416 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 HPS6Q86YV9 775 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 C9orf40Q8IXQ3 194 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 MICU2Q8IYU8 434 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 APCDD1LQ8NCL9 501 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 OR5D16Q8NGK9 328 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 OR8K3Q8NH51 312 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 FBXO30Q8TB52 745 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 M1APQ8TC57 530 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 ELP5Q8TE02 316 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 SLC38A5Q8WUX1 472 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 KCNE4Q8WWG9 221 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 RAB8BQ92930 207 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 MAL2Q969L2 176 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 ADIPOR1Q96A54 375 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 INTS12Q96CB8 462 aaKnown RBP5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 CCDC124Q96CT7 223 aaKnown RBP5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 OTUB1Q96FW1 271 aaPredicted RBP5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 ZC3HAV1LQ96H79 300 aaKnown RBP5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 IMMP1LQ96LU5 166 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 VSTM2LQ96N03 204 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 BTBD9Q96Q07 612 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 OR7D2Q96RA2 312 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 STACQ99469 402 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 LMF2Q9BU23 707 aaKnown RBP5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 DEFB126Q9BYW3 111 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 MUC13Q9H3R2 512 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 PIGUQ9H490 435 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 TMEM38AQ9H6F2 299 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 MMP25Q9NPA2 562 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 A4GALTQ9NPC4 353 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 P4HTMQ9NXG6 502 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 ZNF223Q9UK11 482 aaPredicted RBP5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 FBXL4Q9UKA2 621 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 MKLN1Q9UL63 735 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 LIPT1Q9Y234 373 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 KCNE3Q9Y6H6 103 aa5.33□□□□□ -1.56
NIFKP3-201ENST00000417799 DMXL1Q9Y485 3027 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SPEGQ15772 3267 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 TRBV11-1A0A0K0K1C0 115 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 TMEM272A0A1B0GTI8 110 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 C2orf92A0A1B0GVN3 265 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 FRG2CA6NGY1 282 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 HSPB2A8KAH6 182 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 C5orf58C9J3I9 102 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 IFNL4K9M1U5 179 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 TAF4O00268 1085 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 CXCR6O00574 342 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 ACOT8O14734 319 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 ARPC2O15144 300 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SLC28A2O43868 658 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PRKNO60260 465 aaPredicted RBP5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 DOK2O60496 412 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PTP4A3O75365 173 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 GMNNO75496 209 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 CIB2O75838 187 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 ZFAND5O76080 213 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SORBS2O94875 1100 aaKnown RBP5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 NDUFB8O95169 186 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 AK1P00568 194 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 TFP02787 698 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 TFPTP0C1Z6 253 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 NR2F1P10589 423 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PRF1P14222 555 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SRD5A1P18405 259 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 GGT1P19440 569 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 DRD5P21918 477 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 GABRA3P34903 492 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PCGF2P35227 344 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 CDH12P55289 794 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PSPHP78330 225 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 CDK6Q00534 326 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 MS4A2Q01362 244 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 RBBP4Q09028 425 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 TRAP1Q12931 704 aaKnown RBP5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 BNIP2Q12982 314 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SRSF6Q13247 344 aaKnown RBP5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SCARB2Q14108 478 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 VEZF1Q14119 521 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 GNA13Q14344 377 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 EBPQ15125 230 aaKnown RBP5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 MAPK11Q15759 364 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 HSPB2Q16082 182 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SYPL1Q16563 259 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 ARHGAP11BQ3KRB8 267 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 Q5PR19 223 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PXDC1Q5TGL8 231 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PRAMEF8Q5VWM4 474 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 PRAMEF7Q5VXH5 474 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 REEP3Q6NUK4 255 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 NPSR1Q6W5P4 371 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SLC16A12Q6ZSM3 486 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 C16orf62Q7Z3J2 963 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 DHFR2Q86XF0 187 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 SLC30A8Q8IWU4 369 aa5.32□□□□□ -1.56
NIFKP3-201ENST00000417799 COX18Q8N8Q8 333 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms