RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SLC18A2Q05940 514 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 CYP24A1Q07973 514 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SF3A3Q12874 501 aaKnown RBP eCLIP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF155Q12901 538 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 FHL3Q13643 280 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TMED2Q15363 201 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNHIT3Q15649 155 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC1A5Q15758 541 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SNRNP35Q16560 246 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC25A35Q3KQZ1 300 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF404Q494X3 552 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TMEM119Q4V9L6 283 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 OR2B11Q5JQS5 317 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC35D3Q5M8T2 416 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 MLIPQ5VWP3 458 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ATG9BQ674R7 924 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 RAET1GQ6H3X3 334 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 LAMTOR1Q6IAA8 161 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 DPY19L2P1Q6NXN4 242 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 CDC73Q6P1J9 531 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 DOK6Q6PKX4 331 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 CERS6Q6ZMG9 384 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 LCNL1Q6ZST4 164 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 EIF3MQ7L2H7 374 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 STRADAQ7RTN6 431 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 RFX6Q8HWS3 928 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ATPAF2Q8N5M1 289 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 NANOGP1Q8N7R0 232 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF321PQ8N8H1 164 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 BANPQ8N9N5 519 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 OR2AP1Q8NGE2 309 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SPATA22Q8NHS9 363 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 NANPQ8TBE9 248 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC5A11Q8WWX8 675 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ATG4AQ8WYN0 398 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 RSC1A1Q92681 617 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 ISG20Q96AZ6 181 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 OTULINQ96BN8 352 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SFXN2Q96NB2 322 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 CSF3RQ99062 836 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PKP2Q99959 881 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 KATNB1Q9BVA0 655 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 FUNDC2Q9BWH2 189 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 REG4Q9BYZ8 158 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 NAA50Q9GZZ1 169 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 OR51B6Q9H340 312 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 MUC13Q9H3R2 512 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 FN3KQ9H479 309 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 NIT2Q9NQR4 276 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 GPATCH2LQ9NWQ4 482 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TAS2R10Q9NYW0 307 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 IFT80Q9P2H3 777 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC17A7Q9P2U7 560 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TBC1D29Q9UFV1 150 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 STUB1Q9UNE7 303 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC22A14Q9Y267 594 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC6A5Q9Y345 797 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 MAB21L2Q9Y586 359 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 A0A0D9SEW6 157 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 A0A1B0GV90 55 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 A0A1W2PRB8 838 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 OR2W5A6NFC9 320 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 PRR23D1E9PI22 279 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 AIPO00170 330 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 ACOT8O14734 319 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 TP73O15350 636 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 HCN1O60741 890 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 TIPRLO75663 272 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 EIF3GO75821 320 aaKnown RBP eCLIP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 ACSL3O95573 720 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 LALBAP00709 142 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 HPRP00739 348 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 STATHP02808 62 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 C2P06681 752 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 SPARCP09486 303 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 H2AFZP0C0S5 128 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 ELFN1P0C7U0 828 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 F3P13726 295 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 LHCGRP22888 699 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 ME2P23368 584 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 MMP11P24347 488 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 IGFBP5P24593 272 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 PPP2R1BP30154 601 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 CALCRP30988 508 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 RPA3P35244 121 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 COILP38432 576 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 PMELP40967 661 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 GNG10P50151 68 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 AQP5P55064 265 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 CASP9P55211 416 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 CDH15P55291 814 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 NUTF2P61970 127 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 SNRPD1P62314 119 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 HERVK_113P63132 956 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 ACTG1P63261 375 aa4.97□□□□□ -1.61
ECHDC1-206ENST00000417628 CDK3Q00526 305 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms