RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SPTAN1Q13813 2472 aaKnown RBP20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 HNRNPRO43390 633 aaKnown RBP20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 FZD7O75084 574 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 ITGA2P17301 1181 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 IGFBP2P18065 325 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 YAP1P46937 504 aaKnown RBP20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 SORDQ00796 357 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF474Q6S9Z5 364 aaPredicted RBP20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 WDR88Q6ZMY6 472 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 H1FNTQ75WM6 255 aaPredicted RBP20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 GPAT4Q86UL3 456 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 DHFR2Q86XF0 187 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 DMRTC2Q8IXT2 367 aaPredicted RBP20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF100Q8IYN0 542 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 ACBD4Q8NC06 268 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 PRSS27Q9BQR3 290 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 ZNF426Q9BUY5 554 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 ENPP4Q9Y6X5 453 aa20.52■□□□□ 0.88
SMARCB1-205ENST00000417137 RAMP1O60894 148 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 MRPL33O75394 65 aaKnown RBP20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 PDE5AO76074 875 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 BGLAPP02818 100 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 POU2F1P14859 743 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 GRPRP30550 384 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 CD79BP40259 229 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 TRAM2Q15035 370 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 EXOC3L2Q2M3D2 409 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 NKAIN4Q8IVV8 208 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 SCAIQ8N9R8 606 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 OR9K2Q8NGE7 335 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 TMEM239Q8WW34 195 aa20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 SLC7A6OSQ96CW6 309 aaPredicted RBP20.51■□□□□ 0.87
SMARCB1-205ENST00000417137 UTP20O75691 2785 aaKnown RBP20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 HTR3EA5X5Y0 456 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 M0R082 166 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 HIST1H2ABP04908 130 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 NQO1P15559 274 aaKnown RBP20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 RHCEP18577 417 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 PTNP21246 168 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 OR3A2P47893 321 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 FOXD4Q12950 439 aaPredicted RBP20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 HIST2H2BCQ6DN03 193 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 TFAP2EQ6VUC0 442 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 HIST3H2AQ7L7L0 130 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 LSRQ86X29 649 aaPredicted RBP20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 OFCC1Q8IZS5 231 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 ADPRHL1Q8NDY3 354 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 ZNF417Q8TAU3 575 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 HIST1H2ACQ93077 130 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 ASB9Q96DX5 294 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 OXGR1Q96P68 337 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 ZNF587Q96SQ5 575 aaPredicted RBP20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 MED31Q9Y3C7 131 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 FLVCR1Q9Y5Y0 555 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 INTS1Q8N201 2190 aaKnown RBP20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 NOTCH2Q04721 2471 aa20.5■□□□□ 0.87
SMARCB1-205ENST00000417137 J3KTA2 159 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 KPNA4O00629 521 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 DNAJC8O75937 253 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 CNOT4O95628 575 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 CH25HO95992 272 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 IGF2P01344 180 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 MT-ND1P03886 318 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 ZNF43P17038 809 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 CBLP22681 906 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 KIR2DL3P43628 341 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 P2RY4P51582 365 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 FAM27E3Q08E93 113 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 TRAP1Q12931 704 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 PMS2P3Q13401 168 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 POU4F3Q15319 338 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 CYP2R1Q6VVX0 501 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 TMEM255BQ8WV15 326 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 APH1AQ96BI3 265 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 C7orf34Q96L11 122 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 LRGUKQ96M69 825 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 ANKRD19PQ9H560 264 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 FKRPQ9H9S5 495 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 NANSQ9NR45 359 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 MRPL39Q9NYK5 338 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 NDUFAF4Q9P032 175 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 RHCGQ9UBD6 479 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 NDRG3Q9UGV2 375 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 V9GYQ6 96 aa20.49■□□□□ 0.87
SMARCB1-205ENST00000417137 UNC79Q9P2D8 2635 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 LOC102725191A0A1B0GVB3 256 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 TUBAL3A6NHL2 446 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 C16orf97H3BN30 126 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 IL1RL1Q01638 556 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 LTBQ06643 244 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 C1DQ13901 141 aaKnown RBP20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 ZNF74Q16587 644 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 LCN8Q6JVE9 175 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 FAM86B1Q8N7N1 296 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 OR5J2Q8NH18 312 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 TMEM45BQ96B21 275 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 CLPTM1LQ96KA5 538 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 MOGAT1Q96PD6 335 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 HDHD5Q9BXW7 423 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 TRIM15Q9C019 465 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms