RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CLDN2P57739 230 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 RAB5BP61020 215 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 KRT33BQ14525 404 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 DMKNQ6E0U4 476 aaPredicted RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SEC22AQ96IW7 307 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 BBS4Q96RK4 519 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SPSB2Q99619 263 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 VRK1Q99986 396 aaPredicted RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC38A1Q9H2H9 487 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 CACYBPQ9HB71 228 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 IL21RQ9HBE5 538 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SCN2AQ99250 2005 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 ARID1AO14497 2285 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 FEZF1A0PJY2 475 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 F5H0A9 414 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 ICOSLGO75144 302 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 SMIM6P0DI80 62 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 MPIP34949 423 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 FUT5Q11128 374 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMEM220Q6QAJ8 160 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 Q6ZNB5 142 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 Q6ZVU0 165 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 MRPL43Q8N983 215 aaKnown RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR51S1Q8NGJ8 323 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR4C16Q8NGL9 310 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 DVL3Q92997 716 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 ALG14Q96F25 216 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC41A3Q96GZ6 507 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 GLIPR2Q9H4G4 154 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 GHRLQ9UBU3 117 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 GNG8Q9UK08 70 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 FBXL3Q9UKT7 428 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 KIF26AQ9ULI4 1882 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 TRAV1-2A0A0B4J238 106 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 PPM1DO15297 605 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 PRICKLE3O43900 615 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 AGERQ15109 404 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 MICBQ29980 383 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 LY6G5CQ5SRR4 150 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 FAM122BQ7Z309 247 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 LRRTM1Q86UE6 522 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 AMER3Q8N944 861 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 RASGEF1AQ8N9B8 481 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZMYND19Q96E35 227 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 MACROD1Q9BQ69 325 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 PLEKHA1Q9HB21 404 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 CFAP54Q96N23 3096 aa13.54□□□□□ -0.24
NCKIPSD-204ENST00000416649 FAM86C2PA6NEL3 165 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 RFPL4AA6NLU0 287 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 RFPL4AL1F8VTS6 287 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 ACOT7O00154 380 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 KCNAB3O43448 404 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMPRSS11DO60235 418 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 CA3P07451 260 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 HTR2AP28223 471 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 KHKP50053 298 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 HSD11B1LQ7Z5J1 315 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 NAA40Q86UY6 237 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR51A7Q8NH64 312 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 KISS1RQ969F8 398 aaPredicted RBP13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 ARL5BQ96KC2 179 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 NRIP3Q9NQ35 241 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 KLHL28Q9NXS3 571 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SDK1Q7Z5N4 2213 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC22A31A6NKX4 558 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR2AT4A6NND4 320 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 CCSO14618 274 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR2T1O43869 369 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 HTR3BO95264 441 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 C1orf105O95561 183 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SRMP19623 302 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 VIPR2P41587 438 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 MAPK8P45983 427 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 PPT1P50897 306 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 C9orf152Q5JTZ5 239 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 DHRS7BQ6IAN0 325 aaPredicted RBP13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC36A1Q7Z2H8 476 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SNX33Q8WV41 574 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 RAD51AP1Q96B01 352 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 WDR77Q9BQA1 342 aaPredicted RBP13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 FOXJ3Q9UPW0 622 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 WDR87Q6ZQQ6 2873 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 TRAV14DV4A0A0A6YYC5 116 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 POM121BA6NF01 834 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 IFITM5A6NNB3 132 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 RBBP9O75884 186 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 SNAPINO95295 136 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 ACTL6AO96019 429 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 LIPCP11150 499 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 TYRP1P17643 537 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 FAUP35544 74 aaKnown RBP13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 AKR1C3P42330 323 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 CAPZA1P52907 286 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 PCBP4P57723 403 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms