RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SRYQ05066 204 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 FAM120AOSQ5T036 256 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 TIGD3Q6B0B8 471 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 VWA1Q6PCB0 445 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 PIWIL3Q7Z3Z3 882 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 P4HA3Q7Z4N8 544 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 VTCN1Q7Z7D3 282 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 CARM1Q86X55 608 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 DEPDC4Q8N2C3 294 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 CLIP4Q8N3C7 705 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 GPR32P1Q8NGA4 272 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 OR10H5Q8NGA6 315 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 DUSP19Q8WTR2 217 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 SMAP2Q8WU79 429 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 ARHGDIGQ99819 225 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 CHID1Q9BWS9 393 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 PTGES2Q9H7Z7 377 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 PPP4R1LQ9P1A2 415 aa12.04□□□□□ -0.48
RAPGEF1-204ENST00000414781 IGLV3-32A0A0A0MS00 114 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ELOA3DA6NLF2 546 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 SCO2O43819 266 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 CYP7B1O75881 506 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 LINGO3P0C6S8 592 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 UBTFL6P0CB48 400 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 P2RX1P51575 399 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 SMIM11AP58511 58 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ELOA3BQ3SY89 546 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 CLEC2AQ6UVW9 174 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 APOOLQ6UXV4 268 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 C22orf34Q6ZV56 151 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 HMGN2P46Q86SG4 172 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 YRDCQ86U90 279 aaKnown RBP12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ZDHHC21Q8IVQ6 265 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ELOA3Q8NG57 546 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 B4GALNT2Q8NHY0 566 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ZFAND2BQ8WV99 257 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 CNOT9Q92600 299 aaKnown RBP12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 TRIM2Q9C040 744 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 KLHL4Q9C0H6 718 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 DCLRE1BQ9H816 532 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 TMEM27Q9HBJ8 222 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 S100A14Q9HCY8 104 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 RLIMQ9NVW2 624 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 FLRT3Q9NZU0 649 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 RNF115Q9Y4L5 304 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 MAGED1Q9Y5V3 778 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 ENPP4Q9Y6X5 453 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 V9GYQ6 96 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
RAPGEF1-204ENST00000414781 CENPVL1A0A0U1RR11 272 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 CLDN24A6NM45 220 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 TMEM229AB2RXF0 380 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 FAAHO00519 579 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 IGHV4-31P0DP07 118 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 RHCEP18577 417 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 PGCP20142 388 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 FASP25445 335 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 MAGEA2P43356 314 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 OR1E2P47887 323 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 GZMKP49863 264 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 ERFP50548 548 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 GAS1P54826 345 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 RIPK1Q13546 671 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 CBFBQ13951 182 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 CD226Q15762 336 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 GLIPR1L2Q4G1C9 344 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 DESI1Q6ICB0 168 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 TMCO5AQ8N6Q1 288 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 FAM86B1Q8N7N1 296 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 GATSQ8NAP1 163 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 FAM71CQ8NEG0 241 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 OR5W2Q8NH69 310 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 TMEM234Q8WY98 164 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 FANCFQ9NPI8 374 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 SELENONQ9NZV5 590 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 CARD8Q9Y2G2 431 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 CHST2Q9Y4C5 530 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 HEATR5AQ86XA9 2040 aa12.02□□□□□ -0.49
RAPGEF1-204ENST00000414781 SLC22A20A6NK97 555 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 GNGT2O14610 69 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 SSX4O60224 188 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 DEAF1O75398 565 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 CBR3O75828 277 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 KRT36O76013 467 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 NUDT14O95848 222 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 TGM6O95932 706 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 CGAP01215 116 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 SEMG1P04279 462 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 THRBP10828 461 aa12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 KIR2DL2P43627 348 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF1-204ENST00000414781 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms