RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF226Q9NYT6 803 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 APOBEC3BQ9UH17 382 aaKnown RBP8.63□□□□□ -1.03
SNHG3-201ENST00000413987 PLSCR5A0PG75 271 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 CSO75390 466 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 IFNA7P01567 189 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 FABP1P07148 127 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 RPS3P23396 243 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 DCTDP32321 178 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 IDH2P48735 452 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 NUDT6P53370 316 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 CDC42P60953 191 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 HSF2Q03933 536 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 RIN1Q13671 783 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 GTF2H2Q13888 395 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 UBXN2BQ14CS0 331 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 MLF2Q15773 248 aaPredicted RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 GRK1Q15835 563 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SSX1Q16384 188 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 GTF2H2CQ6P1K8 395 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM65Q6PI78 240 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 DPPA4Q7L190 304 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 GOLGA7Q7Z5G4 137 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SIDT2Q8NBJ9 832 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 PLA2G15Q8NCC3 412 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 FAM71CQ8NEG0 241 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 NLGN4YQ8NFZ3 816 aaPredicted RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 WDR36Q8NI36 951 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 DTD1Q8TEA8 209 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 HAS2Q92819 552 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SLC25A46Q96AG3 418 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 TOE1Q96GM8 510 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 LRIG1Q96JA1 1093 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 OR5M11Q96RB7 305 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 GPR21Q99679 349 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 GABRG3Q99928 467 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 MARVELD1Q9BSK0 173 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SCNM1Q9BWG6 230 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 MS4A7Q9GZW8 240 aaPredicted RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SLC25A32Q9H2D1 315 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 LRTM1Q9HBL6 345 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ABCB9Q9NP78 766 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 CLN6Q9NWW5 311 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 HSPB7Q9UBY9 170 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 CLEC2DQ9UHP7 191 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 NAGKQ9UJ70 344 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SCML1Q9UN30 329 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 CSNK1G3Q9Y6M4 447 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 PLXNB3Q9ULL4 1909 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF106Q9H2Y7 1883 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 LOC102723971A0A1B0GUV8 181 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 HYKKA2RU49 373 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 IGLON5A6NGN9 336 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 C1QTNF3-AMACRE9PGA6 284 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SCO1O75880 301 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 DIRAS1O95057 198 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 DRD1P21728 446 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ACRV1P26436 265 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF33BQ06732 778 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 VEZF1Q14119 521 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 TYW3Q6IPR3 259 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 DOK6Q6PKX4 331 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 KIAA1324Q6UXG2 1013 aaKnown RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ERASQ7Z444 233 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ADGRG3Q86Y34 549 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF431Q8TF32 576 aaPredicted RBP8.62□□□□□ -1.03
SNHG3-201ENST00000413987 PPP1R16AQ96I34 528 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 BBS4Q96RK4 519 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 HINT2Q9BX68 163 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 PIGUQ9H490 435 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 NT5DC2Q9H857 520 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ANKRA2Q9H9E1 313 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 FZD3Q9NPG1 666 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF224Q9NZL3 707 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 NCOR1O75376 2440 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 SDK1Q7Z5N4 2213 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 TRPM6Q9BX84 2022 aa8.62□□□□□ -1.03
SNHG3-201ENST00000413987 A0A1W2PQL4 384 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 TNFRSF11BO00300 401 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 WWP2O00308 870 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 OR7A17O14581 309 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 RFXANKO14593 260 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 TOR1AO14656 332 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SOD1P00441 154 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 RAF1P04049 648 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ARSBP15848 533 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 HOXB9P17482 250 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ITGALP20701 1170 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 MAOBP27338 520 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 RGS4P49798 205 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CRISP3P54108 245 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 BTG1P62324 171 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SIGLEC14Q08ET2 396 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SNTA1Q13424 505 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PCOLCEQ15113 449 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SF3A2Q15428 464 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms