RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 ULK3Q6PHR2 472 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 P2RY8Q86VZ1 359 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 SNX32Q86XE0 403 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 WDR31Q8NA23 367 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 OR4D11Q8NGI4 311 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 DNAJA4Q8WW22 397 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-207ENST00000413642 TAMM41Q96BW9 452 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 MUS81Q96NY9 551 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 ARHGDIGQ99819 225 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 TMEM27Q9HBJ8 222 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 USP22Q9UPT9 525 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 SLC25A15Q9Y619 301 aa23.13■■□□□ 1.29
VEGFA-207ENST00000413642 A0A0B4J2E0 115 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 A0A1B0GX12 115 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 LGI1O95970 557 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 PCGF2P35227 344 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 ZNF83P51522 516 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 NCALDP61601 193 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 CYLC2Q14093 348 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-207ENST00000413642 NPTX1Q15818 432 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 REP15Q6BDI9 236 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 RBM45Q8IUH3 476 aaKnown RBP23.12■■□□□ 1.29
VEGFA-207ENST00000413642 LRRC75A-AS1Q8N1F1 130 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 SLC38A4Q969I6 547 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 LRRC58Q96CX6 371 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 SLC47A1Q96FL8 570 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 SLCO5A1Q9H2Y9 848 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 GSX1Q9H4S2 264 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-207ENST00000413642 CCDC134Q9H6E4 229 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 RASD1Q9Y272 281 aa23.12■■□□□ 1.29
VEGFA-207ENST00000413642 RAI1Q7Z5J4 1906 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-207ENST00000413642 M0R082 166 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 MRASO14807 208 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 CDH2P19022 906 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-207ENST00000413642 CD247P20963 164 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 GRPRP30550 384 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 CDH12P55289 794 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 SLC25A3Q00325 362 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 LTBQ06643 244 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 BHLHE22Q8NFJ8 381 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-207ENST00000413642 VANGL1Q8TAA9 524 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-207ENST00000413642 ZNF417Q8TAU3 575 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 ZNF587Q96SQ5 575 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-207ENST00000413642 MCHR1Q99705 422 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 KLHL14Q9P2G3 628 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 LAMP3Q9UQV4 416 aa23.11■■□□□ 1.29
VEGFA-207ENST00000413642 TRAV36DV7A0A075B6V5 113 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 A0A087WUJ7 227 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 VAMP5O95183 116 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 SOD3P08294 240 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 GTF2E2P29084 291 aaKnown RBP23.1■■□□□ 1.29
VEGFA-207ENST00000413642 MDH1P40925 334 aaKnown RBP23.1■■□□□ 1.29
VEGFA-207ENST00000413642 CRYBA2P53672 197 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 NRF1Q16656 503 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 VMACQ2NL98 169 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 MMEL1Q495T6 779 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 ZNF672Q499Z4 452 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-207ENST00000413642 SHEQ5VZ18 495 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 FAM91A1Q658Y4 838 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 NIPAL3Q6P499 406 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 LINGO2Q7L985 606 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 OR6T1Q8NGN1 323 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 TMEM171Q8WVE6 324 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 AMBRA1Q9C0C7 1298 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 ARMCX1Q9P291 453 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 B3GAT1Q9P2W7 334 aa23.1■■□□□ 1.29
VEGFA-207ENST00000413642 SHISA9B4DS77 424 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 ABCD4O14678 606 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 ARHGEF9O43307 516 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 FZD7O75084 574 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 UPK3AO75631 287 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 PTH2RP49190 550 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 CLDN17P56750 224 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 SPOCK1Q08629 439 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 FAM69AQ5T7M9 428 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 OR7E24Q6IFN5 339 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 PATL1Q86TB9 770 aaKnown RBP23.09■■□□□ 1.29
VEGFA-207ENST00000413642 RANBP3LQ86VV4 465 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-207ENST00000413642 TSPYL5Q86VY4 417 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-207ENST00000413642 CALHM3Q86XJ0 350 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 C10orf82Q8WW14 230 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 ZNF317Q96PQ6 595 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-207ENST00000413642 MED4Q9NPJ6 270 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 SLC17A5Q9NRA2 495 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 SELENONQ9NZV5 590 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 ROS1P08922 2347 aa23.09■■□□□ 1.29
VEGFA-207ENST00000413642 CPSF4LA6NMK7 179 aaKnown RBP23.08■■□□□ 1.29
VEGFA-207ENST00000413642 LRRN3E7EW58 273 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 OR2T1O43869 369 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 THY1P04216 161 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 DANCRP0C864 163 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 MPGP29372 298 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 YTHDF3Q7Z739 585 aaKnown RBP23.08■■□□□ 1.29
VEGFA-207ENST00000413642 POMGNT2Q8NAT1 580 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 FBXW5Q969U6 566 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 GSX2Q9BZM3 304 aa23.08■■□□□ 1.29
VEGFA-207ENST00000413642 M0R1B8 84 aa23.07■■□□□ 1.28
VEGFA-207ENST00000413642 KRT33AO76009 404 aa23.07■■□□□ 1.28
VEGFA-207ENST00000413642 HPRP00739 348 aa23.07■■□□□ 1.28
VEGFA-207ENST00000413642 BGLAPP02818 100 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms