RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 PFN4Q8NHR9 129 aa12.4□□□□□ -0.42
CPNE1-206ENST00000412056 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
CPNE1-206ENST00000412056 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-206ENST00000412056 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
CPNE1-206ENST00000412056 FNDC11Q9BVV2 318 aa12.4□□□□□ -0.42
CPNE1-206ENST00000412056 CHST11Q9NPF2 352 aa12.4□□□□□ -0.42
CPNE1-206ENST00000412056 MEPEQ9NQ76 525 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-206ENST00000412056 NDUFAF4Q9P032 175 aa12.4□□□□□ -0.42
CPNE1-206ENST00000412056 C6orf203Q9P0P8 240 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-206ENST00000412056 PKDREJQ9NTG1 2253 aa12.4□□□□□ -0.42
CPNE1-206ENST00000412056 USP9YO00507 2555 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 ENO4A6NNW6 628 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 ZNF724A8MTY0 619 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 A8MXE2 369 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 GSC2O15499 205 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 CH25HO95992 272 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 CD8BP10966 210 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 EDNRAP25101 427 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 IFNA8P32881 189 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 RBM34P42696 430 aaKnown RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 RASSF2P50749 326 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 LSM11P83369 360 aaKnown RBP eCLIP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 TRAP1Q12931 704 aaKnown RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 SLC17A1Q14916 467 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 TRAM2Q15035 370 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 ZNF474Q6S9Z5 364 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 CYP4Z1Q86W10 505 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 PIK3C3Q8NEB9 887 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 TMEM239Q8WW34 195 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 RNASE6Q93091 150 aaKnown RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 MCUR1Q96AQ8 359 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 SEPHS2Q99611 448 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 RBM24Q9BX46 236 aaKnown RBP12.39□□□□□ -0.43
CPNE1-206ENST00000412056 SLC19A3Q9BZV2 496 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 PLSCR4Q9NRQ2 329 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 C20orf141Q9NUB4 165 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 GALNT8Q9NY28 637 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 FLVCR1Q9Y5Y0 555 aa12.39□□□□□ -0.43
CPNE1-206ENST00000412056 ALPK2Q86TB3 2170 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 GPR171O14626 319 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 MT-ATP6P00846 226 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 MT-ND1P03886 318 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 FABP3P05413 133 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 RHCEP18577 417 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 UQCRC1P31930 480 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 NTF4P34130 210 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 SNTB1Q13884 538 aaKnown RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 MFSD13AQ14CX5 517 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 ZNF74Q16587 644 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 TMEM225Q6GV28 225 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 H1FNTQ75WM6 255 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 SLC46A3Q7Z3Q1 461 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 GALNT5Q7Z7M9 940 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 ZDHHC21Q8IVQ6 265 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 KDM8Q8N371 416 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 OR9K2Q8NGE7 335 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 LRGUKQ96M69 825 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 HS6ST2Q96MM7 605 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 ASPNQ9BXN1 380 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 NMNAT1Q9HAN9 279 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 B3GAT1Q9P2W7 334 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 RASD1Q9Y272 281 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 MED31Q9Y3C7 131 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 FAM32AQ9Y421 112 aaKnown RBP12.38□□□□□ -0.43
CPNE1-206ENST00000412056 CORINQ9Y5Q5 1042 aa12.38□□□□□ -0.43
CPNE1-206ENST00000412056 STAMBPO95630 424 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 HPRP00739 348 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 H1F0P07305 194 aaKnown RBP12.37□□□□□ -0.43
CPNE1-206ENST00000412056 IGFBP2P18065 325 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 OR3A2P47893 321 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 SPIBQ01892 262 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 PMS2P3Q13401 168 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 EXOC3L2Q2M3D2 409 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 FGD3Q5JSP0 725 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 LRRC17Q8N6Y2 441 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 ADPRHL1Q8NDY3 354 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 OR5J2Q8NH18 312 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 SGTBQ96EQ0 304 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 LRRC46Q96FV0 321 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 ZNF385AQ96PM9 386 aaKnown RBP12.37□□□□□ -0.43
CPNE1-206ENST00000412056 PIP5K1AQ99755 562 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
CPNE1-206ENST00000412056 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 KLHL4Q9C0H6 718 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 MRPL39Q9NYK5 338 aaKnown RBP12.37□□□□□ -0.43
CPNE1-206ENST00000412056 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
CPNE1-206ENST00000412056 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms