RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FAM204AQ9H8W3 233 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 WDR54Q9H977 334 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 WDR41Q9HAD4 459 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SYTL2Q9HCH5 934 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 XAB2Q9HCS7 855 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 PLCB1Q9NQ66 1216 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TIGARQ9NQ88 270 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CNGB3Q9NQW8 809 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 NDUFB11Q9NX14 153 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC25A37Q9NYZ2 338 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 IL37Q9NZH6 218 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SPASTQ9UBP0 616 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MORF4L1Q9UBU8 362 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MTRF1LQ9UGC7 380 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC25A13Q9UJS0 675 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 HHLA3Q9XRX5 114 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 LSM4Q9Y4Z0 139 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 RBM7Q9Y580 266 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MORC2Q9Y6X9 1032 aaPredicted RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 R4GN57 208 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 BRCA2P51587 3418 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 NFASCO94856 1347 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZMYM6O95789 1325 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CCDC163A0A0D9SF12 145 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 A0A1B0GVL5 298 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 A0A1W2PRM7 423 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR5K3A6NET4 321 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF705FA8MVS1 300 aaPredicted RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 IBA57-AS1B1ANH7 110 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PRAMEF26H0Y7S4 382 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 H7BYZ3 331 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 UPK1AO00322 258 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SCAMP2O15127 329 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 BUD23O43709 281 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 DNAJB6O75190 326 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CDK2AP2O75956 126 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SIX3O95343 332 aaPredicted RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PARNO95453 639 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 AP2A1O95782 977 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 GPR75O95800 540 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 TK1P04183 234 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 LDHCP07864 332 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 HMOX1P09601 288 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 GIPP09681 153 aaPredicted RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 IFIT2P09913 472 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 LINGO3P0C6S8 592 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 MYBL1P10243 752 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PEPDP12955 493 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CYP4B1P13584 511 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 NPR1P16066 1061 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PTGER4P35408 488 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 MYCNOSP40205 109 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 RBM34P42696 430 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 HTR3AP46098 478 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PITPNBP48739 271 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CHRNDQ07001 517 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 KLKP1Q107X0 134 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ATP6AP1Q15904 470 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF726P1Q15940 193 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 IQCJQ1A5X6 159 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SMU1Q2TAY7 513 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 GLYR1Q49A26 553 aaPredicted RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAB6CQ53S08 254 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SPIN4Q56A73 249 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR2B11Q5JQS5 317 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 HECTD3Q5T447 861 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PRSS54Q6PEW0 395 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 C6orf89Q6UWU4 347 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 BTNL8Q6UX41 500 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CD300LGQ6UXG3 332 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM43BQ6ZT52 329 aaPredicted RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PGAP1Q75T13 922 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 MCM10Q7L590 875 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 OTUD6AQ7L8S5 288 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRIM69Q86WT6 500 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CPNE9Q8IYJ1 553 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC22A24Q8N4F4 322 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 TSPYL6Q8N831 410 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ACOT4Q8N9L9 421 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ICA1LQ8NDH6 482 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ACVR1CQ8NER5 493 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 BEST2Q8NFU1 509 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 NPBQ8NG41 125 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR4D10Q8NGI6 311 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR52K1Q8NGK4 314 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ACTRT1Q8TDG2 376 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ASB17Q8WXJ9 295 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR5P2Q8WZ92 322 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SGCDQ92629 289 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 MRPS31Q92665 395 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ANAPC16Q96DE5 110 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PGM2Q96G03 612 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 MSLNLQ96KJ4 702 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PEBP4Q96S96 227 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 TXN2Q99757 166 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLX1AQ9BQ83 275 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 DCUN1D5Q9BTE7 237 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SRXN1Q9BYN0 137 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CTDSP1Q9GZU7 261 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CLPBQ9H078 707 aa-2.07□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms