RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 MRPS12O15235 138 aaKnown RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 DUX1O43812 170 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 TBX19O60806 448 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 TBCAO75347 108 aaKnown RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 KLHL2O95198 593 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CA1P00915 261 aaPredicted RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 BGLAPP02818 100 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 OPN1MWP04001 364 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ALDOBP05062 364 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CENPBP07199 599 aaPredicted RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 OPN1MW2P0DN77 364 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 OPN1MW3P0DN78 364 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CYLC1P35663 651 aaPredicted RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 OPRK1P41145 380 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 SRP54P61011 504 aaKnown RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 RAB40BQ12829 278 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 FZD2Q14332 565 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 IHHQ14623 411 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CYTH1Q15438 398 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 TYSND1Q2T9J0 566 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 KRTAP21-3Q3LHN1 58 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 TTLL9Q3SXZ7 439 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 PCOTHQ58A44 107 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 FAM78AQ5JUQ0 283 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 HES5Q5TA89 166 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ADNP2Q6IQ32 1131 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 FAHD2BQ6P2I3 314 aaPredicted RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 PRMT9Q6P2P2 845 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 DLEU7Q6UYE1 221 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 APTXQ7Z2E3 356 aaKnown RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZSCAN30Q86W11 494 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CERS3Q8IU89 383 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 UNC45BQ8IWX7 931 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 EFCAB13Q8IY85 973 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CNNM3Q8NE01 707 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF680Q8NEM1 530 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 TMEM185AQ8NFB2 350 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 OR5L2Q8NGL0 311 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 OR2G3Q8NGZ4 309 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CIRBP-AS1Q8TBR5 109 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 FAHD2AQ96GK7 314 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF560Q96MR9 790 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF382Q96SR6 550 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF385DQ9H6B1 395 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 RPAP3Q9H6T3 665 aaPredicted RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 TM9SF3Q9HD45 589 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CTPS2Q9NRF8 586 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 HOXC10Q9NYD6 342 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 MRPL39Q9NYK5 338 aaKnown RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 CD84Q9UIB8 345 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF490Q9ULM2 529 aaPredicted RBP0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 ATP10DQ9P241 1426 aa0.11□□□□□ -2.39
RNU4-43P-201ENST00000410628 SCN4AP35499 1836 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 RPAP1Q9BWH6 1393 aaPredicted RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF320A2RRD8 509 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 C12orf77C9JDV5 145 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 E9PMD0 336 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 SPECC1L-ADORA2AF8WAN1 911 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 SGK494L7N484 410 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 XKRYO14609 159 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 TAPBPO15533 448 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 NDUFA7O95182 113 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 IGLV2-8P01709 118 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZDHHC11BP0C7U3 371 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 UBTFL1P0CB47 393 aaPredicted RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 IGHV3-43DP0DP04 118 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 CLUP10909 449 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 SCG2P13521 617 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 HPGDP15428 266 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 TCP1P17987 556 aaKnown RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 NPR2P20594 1047 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 BDNFP23560 247 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 RDXP35241 583 aaKnown RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ATXN3P54252 364 aaPredicted RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 PRRX1P54821 245 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 STX1BP61266 288 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 SSTP61278 116 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 RPS14P62263 151 aaKnown RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 SLC7A9P82251 487 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ACVR1Q04771 509 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 BFSP1Q12934 665 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ERCC8Q13216 396 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 TRIM16LQ309B1 348 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZBED5Q49AG3 693 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 DEFB134Q4QY38 66 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 STUMQ69YW2 141 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZFP1Q6P2D0 407 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 CES3Q6UWW8 571 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 HSDL2Q6YN16 418 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 NLRP9Q7RTR0 991 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 BHLHA15Q7RTS1 189 aaPredicted RBP0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 C16orf62Q7Z3J2 963 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ZNF410Q86VK4 478 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 OR8H3Q8N146 312 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 KIR3DL3Q8N743 410 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 TMEM105Q8N8V8 129 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ATP6V0D2Q8N8Y2 350 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 ST20-AS1Q8NBB2 130 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 LEMD2Q8NC56 503 aa0.1□□□□□ -2.39
RNU4-43P-201ENST00000410628 OR4K14Q8NGD5 310 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms