RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KHDRBS3O75525 346 aaKnown RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 ZNF806P0C7X5 589 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 MAGEA8P43361 318 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 RGS6P49758 472 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 PLXNA3P51805 1871 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 PRPS1P60891 318 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 CACNA1DQ01668 2161 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 ZNF117Q03924 483 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 ZNF91Q05481 1191 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 TSPAN31Q12999 210 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 MRM1Q6IN84 353 aaKnown RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 OGFOD3Q6PK18 319 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 BBS1Q8NFJ9 593 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 ENKURQ8TC29 256 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 SLC41A2Q96JW4 573 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 ALG8Q9BVK2 526 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 GPANK1O95872 356 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 PRPH2P23942 346 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 DCKP27707 260 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 SLC1A3P43003 542 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 CLDN15P56746 228 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 CFHR1Q03591 330 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 SLC10A1Q14973 349 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 MEP1BQ16820 701 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 KCTD18Q6PI47 426 aaPredicted RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 PAQR6Q6TCH4 344 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 LRRN1Q6UXK5 716 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 CLDN22Q8N7P3 220 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 HDAC2Q92769 488 aaKnown RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 NAA50Q9GZZ1 169 aaKnown RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 TAS2R7Q9NYW3 318 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 CLEC2DQ9UHP7 191 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 NOSIPQ9Y314 301 aaKnown RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 CDHR4A6H8M9 788 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 SAGE2PA6NJ88 616 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 H0YAE9 185 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 IGHEP01854 428 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 FOXK2Q01167 660 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 FZD5Q13467 585 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 LCN10Q6JVE6 187 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 PLCZ1Q86YW0 608 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 CHDHQ8NE62 594 aaPredicted RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 SPRYD4Q8WW59 207 aaPredicted RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 C4orf36Q96KX1 117 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 FRMD6Q96NE9 622 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 TRIB1Q96RU8 372 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 BEX2Q9BXY8 128 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 LHPPQ9H008 270 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 BEX1Q9HBH7 125 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 EMC7Q9NPA0 242 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 ZNF346Q9UL40 294 aaKnown RBP10.4□□□□□ -0.74
SNX13-202ENST00000409604 A8MVM7 634 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 RLN1P04808 185 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CCL3P10147 92 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 GLO1Q04760 184 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 TRA2AQ13595 282 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNX13-202ENST00000409604 PROX2Q3B8N5 592 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ADPRMQ3LIE5 342 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CCDC80Q76M96 950 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 PIWIL3Q7Z3Z3 882 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 C1orf216Q8TAB5 229 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 NEIL3Q8TAT5 605 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 KCTD7Q96MP8 289 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ALKBH3Q96Q83 286 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 OR51E2Q9H255 320 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ADAM30Q9UKF2 790 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 RALYQ9UKM9 306 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 ACOX3O15254 700 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 OIP5O43482 229 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CSNK2A1P68400 391 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 HNRNPA0Q13151 305 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 DUSP8Q13202 625 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 YOD1Q5VVQ6 348 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 QSOX2Q6ZRP7 698 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 TMPRSS12Q86WS5 348 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 GID4Q8IVV7 300 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 SLITRK4Q8IW52 837 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 GLB1L2Q8IW92 636 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 OR4D11Q8NGI4 311 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 GOT1L1Q8NHS2 421 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 WFDC6Q9BQY6 131 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 HES7Q9BYE0 225 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 SLC6A15Q9H2J7 730 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 HMG20AQ9NP66 347 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CHD9Q3L8U1 2897 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 A0A087WV62 115 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CHP2O43745 196 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CAPNS1P04632 268 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 GADD45AP24522 165 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ARFRP1Q13795 201 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CNPY1Q3B7I2 92 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 FAM69AQ5T7M9 428 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ZNF681Q96N22 645 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 SH3GL3Q99963 347 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 PLA2G12AQ9BZM1 189 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ENKD1Q9H0I2 346 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms