RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 GABRB1P18505 474 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 PSMB9P28065 219 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 BUD31P41223 144 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 BMXP51813 675 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 GFRA1P56159 465 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 HSPB3Q12988 150 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 MAPK11Q15759 364 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 HLA-DQA1Q5Y7H0 255 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 TNFAIP8L2Q6P589 184 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 VWA1Q6PCB0 445 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 Q6ZNX1 250 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF550Q7Z398 422 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 SMYD1Q8NB12 490 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 SFXN5Q8TD22 340 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 PROX1Q92786 737 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 UBE2FQ969M7 185 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 EXOSC8Q96B26 276 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF607Q96SK3 696 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 NIPSNAP1Q9BPW8 284 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 COPS4Q9BT78 406 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 OR2B2Q9GZK3 357 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 PIGMQ9H3S5 423 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF226Q9NYT6 803 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 MXRA5Q9NR99 2828 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 TMEM247A6NEH6 219 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 B4DXG7 233 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 J3KTA2 159 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 MPZL2O60487 215 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 PPM1BO75688 479 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 OXSR1O95747 527 aaPredicted RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 ADAP00813 363 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 CDK1P06493 297 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF12P17014 697 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 NTSP30990 170 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 CCKARP32238 428 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 MC3RP41968 323 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 KCNJ5P48544 419 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 CCT3P49368 545 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 LHX2P50458 406 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 ANXA11P50995 505 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 NRG3P56975 720 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 SMIM11AP58511 58 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 DUSP7Q16829 419 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF770Q6IQ21 691 aaPredicted RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 FAM111BQ6SJ93 734 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 AHSA2Q719I0 299 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 GALNT12Q8IXK2 581 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 GPR32P1Q8NGA4 272 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 OR9Q2Q8NGE9 314 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 OR52J3Q8NH60 311 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 OR14L1PQ8NHC6 308 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 STARD4Q96DR4 205 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 PLEKHA8Q96JA3 519 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 SLC35G5Q96KT7 338 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 ZFP3Q96NJ6 502 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 AMDHD1Q96NU7 426 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 RHNO1Q9BSD3 238 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 OPN3Q9H1Y3 402 aaPredicted RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 SLC35C2Q9NQQ7 365 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 RYDENQ9NUL5 291 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 TBCCD1Q9NVR7 557 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 LYARQ9NX58 379 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 P2RX2Q9UBL9 471 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 SH3GLB1Q9Y371 365 aa11.4□□□□□ -0.58
CHRNA1-205ENST00000409542 CHD3Q12873 2000 aaKnown RBP11.4□□□□□ -0.59
CHRNA1-205ENST00000409542 ROS1P08922 2347 aa11.4□□□□□ -0.59
CHRNA1-205ENST00000409542 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 ZAR1LA6NP61 321 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 C17orf51A8MQB3 221 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 FAAHO00519 579 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 CRLF1O75462 422 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 CRYGSP22914 178 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 TCEA1P23193 301 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 TGFBR2P37173 567 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 PTH2RP49190 550 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 KHKP50053 298 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 CLDN18P56856 261 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 CDC42P60953 191 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 RPS26P62854 115 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 MGAT2Q10469 447 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 RPS26P11Q5JNZ5 115 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC30A6Q6NXT4 461 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 BTLAQ7Z6A9 289 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 CCDC103Q8IW40 242 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 BBS10Q8TAM1 723 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 MIPOL1Q8TD10 442 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 IGFBPL1Q8WX77 278 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 GGHQ92820 318 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC38A4Q969I6 547 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 MOAP1Q96BY2 351 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 OMA1Q96E52 524 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 ITPAQ9BY32 194 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 GLIPR2Q9H4G4 154 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 SERHL2Q9H4I8 314 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms