RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CAMKMTQ7Z624 323 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 HOMEZQ8IX15 550 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ZFP82Q8N141 532 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 MS4A15Q8N5U1 240 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 CSNK1A1LQ8N752 337 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 BMPERQ8N8U9 685 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 GALNT6Q8NCL4 622 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 GPR119Q8TDV5 335 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 FCAMRQ8WWV6 532 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ZNF775Q96BV0 537 aaPredicted RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 MS4A4EQ96PG1 132 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ADOQ96SZ5 270 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 SYT4Q9H2B2 425 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 SESN1Q9Y6P5 492 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 U3KQ87 197 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ANAPC1Q9H1A4 1944 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 IRGMA1A4Y4 181 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 SLC22A31A6NKX4 558 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 CLEC3AO75596 197 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 KRT33AO76009 404 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 IGF2P01344 180 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 HIST1H2ABP04908 130 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 SLC2A1P11166 492 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 AKR1C4P17516 323 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 CDK2P24941 298 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 GRK6P43250 576 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 EOGTQ5NDL2 527 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 CARD17Q5XLA6 110 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 PYHIN1Q6K0P9 492 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 HIST3H2AQ7L7L0 130 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 BPHLQ86WA6 291 aaPredicted RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 IQCF2Q8IXL9 164 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 LRRC56Q8IYG6 542 aaPredicted RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 RSC1A1Q92681 617 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 HIST1H2ACQ93077 130 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 FCRL1Q96LA6 429 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 APOOQ9BUR5 198 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 GTPBP2Q9BX10 602 aaKnown RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 MEPEQ9NQ76 525 aaPredicted RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 CALML5Q9NZT1 146 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 KLHL42Q9P2K6 505 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 COLEC10Q9Y6Z7 277 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 WDFY3Q8IZQ1 3526 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ESPL1Q14674 2120 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 SCN4AP35499 1836 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 MED19A0JLT2 244 aaPredicted RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 C5orf51A6NDU8 294 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ADAM11O75078 769 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 PEBP1P30086 187 aaKnown RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 SLC6A6P31641 620 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 DRD3P35462 400 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 EIF2B1Q14232 305 aaKnown RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 CORO6Q6QEF8 472 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 KIRREL2Q6UWL6 708 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 GID4Q8IVV7 300 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 TMEM106AQ96A25 262 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 VOPP1Q96AW1 172 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 S100A16Q96FQ6 103 aaKnown RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 MED30Q96HR3 178 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 OR2M4Q96R27 311 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 PLA2G2FQ9BZM2 168 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 ACSS1Q9NUB1 689 aaPredicted RBP7.66□□□□□ -1.18
SNX13-201ENST00000409076 PFDN2Q9UHV9 154 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 TRAPPC4Q9Y296 219 aa7.66□□□□□ -1.18
SNX13-201ENST00000409076 DENND4CQ5VZ89 1909 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 IGHV3-20A0A0C4DH32 117 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 LOC105371267A0A1B0GV96 52 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 KDM4EB2RXH2 506 aaPredicted RBP7.65□□□□□ -1.18
SNX13-201ENST00000409076 ZNHIT1O43257 154 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 MPC2O95563 127 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 RAF1P04049 648 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 IGFALSP35858 605 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 NUP62P37198 522 aaPredicted RBP7.65□□□□□ -1.18
SNX13-201ENST00000409076 GPM6BQ13491 265 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 RUNX3Q13761 415 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 EXOSC6Q5RKV6 272 aaKnown RBP7.65□□□□□ -1.18
SNX13-201ENST00000409076 ZBTB37Q5TC79 503 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 C1QL3Q5VWW1 255 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 PAQR7Q86WK9 346 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 GLB1L2Q8IW92 636 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 SPERTQ8NA61 448 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 OR51S1Q8NGJ8 323 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 OR4C3Q8NH37 302 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 DNAJA4Q8WW22 397 aaPredicted RBP7.65□□□□□ -1.18
SNX13-201ENST00000409076 PELI1Q96FA3 418 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 CHST6Q9GZX3 395 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 PCBD2Q9H0N5 130 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 PIGUQ9H490 435 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 PELI2Q9HAT8 420 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 GSKIPQ9P0R6 139 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 RABL2AQ9UBK7 228 aaPredicted RBP7.65□□□□□ -1.18
SNX13-201ENST00000409076 KCNE5Q9UJ90 142 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 DSPPQ9NZW4 1301 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 H3BML4 177 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 TNFSF12O43508 249 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 CALCBP10092 127 aa7.65□□□□□ -1.18
SNX13-201ENST00000409076 FPR3P25089 353 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms