RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TMEM161BQ8NDZ6 487 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 OR1F12Q8NHA8 337 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 M1APQ8TC57 530 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 MAIP1Q8WWC4 291 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 NR4A3Q92570 626 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF689Q96CS4 500 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 PIWIL1Q96J94 861 aaKnown RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 MS4A14Q96JA4 679 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CNDP1Q96KN2 507 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 RBM14Q96PK6 669 aaKnown RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 NPAS2Q99743 824 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 PPDPFQ9H3Y8 114 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 SMOXQ9NWM0 555 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 HOXC10Q9NYD6 342 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 MDFICQ9P1T7 246 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF221Q9UK13 617 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 PTBP2Q9UKA9 531 aaKnown RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 SAMD4AQ9UPU9 718 aaKnown RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 PIGLQ9Y2B2 252 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 SIPA1L1O43166 1804 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 BAZ2BQ9UIF8 2168 aaKnown RBP3.78□□□□□ -1.81
HMGB3P18-201ENST00000406327 CDK5RAP2Q96SN8 1893 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SCN9AQ15858 1988 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 XKRY2A2RUG3 117 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 TMEM150BA6NC51 233 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 EFCAB7A8K855 629 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 G3V3Y1 287 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 G3V4G9 280 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC16A4O15374 487 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 TAPBPO15533 448 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 KBTBD11O94819 623 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 MELTFP08582 738 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 NF2P35240 595 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR1D4P47884 311 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 GCLMP48507 274 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 HMGCS2P54868 508 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 CDH4P55283 916 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ACTR3P61158 418 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ENPEPQ07075 957 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 MXD4Q14582 209 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 LAGE3Q14657 143 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 DPYSL2Q16555 572 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC5A12Q1EHB4 618 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 GGTA1PQ4G0N0 100 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 PHYHD1Q5SRE7 291 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 PRSS48Q7RTY5 328 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC25A42Q86VD7 318 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 APOBEC3FQ8IUX4 373 aaKnown RBP3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 CDH26Q8IXH8 852 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF440Q8IYI8 595 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC38A6Q8IZM9 456 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SYCE1Q8N0S2 351 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 TMEM123Q8N131 208 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 C17orf47Q8NEP4 570 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR5D13Q8NGL4 314 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF671Q8TAW3 534 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ACTRT1Q8TDG2 376 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 TRUB1Q8WWH5 349 aaKnown RBP3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 RASL10AQ92737 203 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 KIFAP3Q92845 792 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 TOMM40LQ969M1 308 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 FBXO32Q969P5 355 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 PELI1Q96FA3 418 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 CEP170P1Q96L14 293 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 EDEM2Q9BV94 578 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ELOVL4Q9GZR5 314 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 LRRN3Q9H3W5 708 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF385DQ9H6B1 395 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 MED4Q9NPJ6 270 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 MEPEQ9NQ76 525 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 DPM3Q9P2X0 92 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 SEC14L3Q9UDX4 400 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 PRODH2Q9UF12 536 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 LCMT1Q9UIC8 334 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 PACSIN2Q9UNF0 486 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 COQ4Q9Y3A0 265 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 NAALAD2Q9Y3Q0 740 aa3.77□□□□□ -1.81
HMGB3P18-201ENST00000406327 RGPD3A6NKT7 1758 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 RGPD4Q7Z3J3 1758 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 NFASCO94856 1347 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 TNS1Q9HBL0 1735 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 MYH6P13533 1939 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 GOLGA8IPA6NC78 632 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SAGE2PA6NJ88 616 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 ACOD1A6NK06 481 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 GOLGA8JA6NMD2 632 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 ANKRD63C9JTQ0 380 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 E9PAM4 449 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC17A2O00624 439 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 FCMRO60667 390 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 CIB2O75838 187 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 GJB5O95377 273 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 RENP00797 406 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 HOXD4P09016 255 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 GZMAP12544 262 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 CCDC130P13994 396 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 POU2F1P14859 743 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 GTF2H1P32780 548 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 FNTAP49354 379 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 CCT3P49368 545 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms