RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 SQSTM1Q13501 440 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 CLSTN3Q9BQT9 956 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 QRSL1Q9H0R6 528 aaKnown RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 WDR76Q9H967 626 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ALX3O95076 343 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 RPP30P78346 268 aaKnown RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 FCN2Q15485 313 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 MEX3BQ6ZN04 569 aaKnown RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNED1-205ENST00000405547 Q6ZSR6 202 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 C12orf76Q8N812 135 aaPredicted RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 MIB2Q96AX9 1013 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 CXXC1Q9P0U4 656 aaPredicted RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 IGHG1P01857 330 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ACVR1Q04771 509 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 SLC39A5Q6ZMH5 540 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 TERB2Q8NHR7 220 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 C3orf49Q96BT1 292 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 SGCZQ96LD1 299 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 AMDHD1Q96NU7 426 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ZIC5Q96T25 663 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ARPC5LQ9BPX5 153 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 CHRDQ9H2X0 955 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 PLEK2Q9NYT0 353 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 CEP290O15078 2479 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 PRSS38A1L453 326 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ARL3P36405 182 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 XCR1P46094 333 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 TNK1Q13470 666 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 MLC1Q15049 377 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 SYT14P1Q58G82 188 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 BEX5Q5H9J7 111 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 TECPR1Q7Z6L1 1165 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 RBPMSQ93062 196 aaKnown RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 NECTIN4Q96NY8 510 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 C1orf198Q9H425 327 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 CACNA1IQ9P0X4 2223 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ATP1B1P05026 303 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ETV1P50549 477 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 C5orf46Q6UWT4 87 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 DPY19L2P2Q6ZN68 376 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 USP53Q70EK8 1073 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 ZNF761Q86XN6 746 aaPredicted RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 MACROD1Q9BQ69 325 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 MCOLN1Q9GZU1 580 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 TMEM100Q9NV29 134 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
SNED1-205ENST00000405547 MYO16Q9Y6X6 1858 aa12.41□□□□□ -0.42
SNED1-205ENST00000405547 CIB4A0PJX0 185 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 B4DXG7 233 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 SULT2B1O00204 365 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 TK1P04183 234 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 TSFMP43897 325 aaKnown RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 POLR2HP52434 150 aaKnown RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 EFNA3P52797 238 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 CTU2Q2VPK5 515 aaKnown RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 DYNC2LI1Q8TCX1 351 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 CPNE7Q9UBL6 633 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 ADAM18Q9Y3Q7 739 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 OIP5O43482 229 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 KCNK2O95069 426 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 HOXB5P09067 269 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 LIPCP11150 499 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 SNU13P55769 128 aaKnown RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 GPR155Q7Z3F1 870 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 SENP5Q96HI0 755 aaPredicted RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 ACKR4Q9NPB9 350 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 PSMB5P28074 263 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 CCR9P51686 369 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 STEAP1BQ6NZ63 245 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 MCATQ8IVS2 390 aaKnown RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 FAM26EQ8N5C1 309 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 OR56B1Q8NGI3 324 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 SSX3Q99909 188 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 NOX4Q9NPH5 578 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 FBXL2Q9UKC9 423 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 PMS2P2O95744 297 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 HTR2CP28335 458 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 NUDT1P36639 197 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 CSNK1A1P48729 337 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 ZNF136P52737 540 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 OR2A12Q8NGT7 310 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 OR4K15Q8NH41 348 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 CHST8Q9H2A9 424 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 A8MXE2 369 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 KDM4EB2RXH2 506 aaPredicted RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 TRIM23P36406 574 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 MFGE8Q08431 387 aaPredicted RBP12.4□□□□□ -0.42
SNED1-205ENST00000405547 ADGRF3Q8IZF5 1079 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 TM4SF18Q96CE8 201 aa12.4□□□□□ -0.42
SNED1-205ENST00000405547 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms