RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TNFSF13O75888 250 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 MMP1P03956 469 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 KLK3P07288 261 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 UBTFL1P0CB47 393 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 CD1BP29016 333 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 OPRD1P41143 372 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 CRYBB1P53674 252 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 RIPPLY3P57055 190 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRPS1P60891 318 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF763Q0D2J5 394 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 PDIA2Q13087 525 aaKnown RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 PPIL2Q13356 520 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 CTSL3PQ5NE16 218 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRAMEF5Q5TYX0 476 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRAMEF6Q5VXH4 476 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 LRRC31Q6UY01 552 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 ASCL5Q7RTU5 278 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 MFSD6LQ8IWD5 586 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 FAM83FQ8NEG4 500 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 BRSK1Q8TDC3 778 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 SETD7Q8WTS6 366 aaKnown RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 PLEKHA8Q96JA3 519 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 MS4A4EQ96PG1 132 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 BTNL2Q9UIR0 455 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 TMCO1Q9UM00 188 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 NPTNQ9Y639 398 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 KIF25-AS1Q9Y6Z4 181 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 SH3TC1Q8TE82 1336 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR5B21A6NL26 309 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 LOC110117498-PIK3R3F6TDL0 507 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 GOLGA8SH3BPF8 625 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ABCD4O14678 606 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 EMC8O43402 210 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ACTL6AO96019 429 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 COX7A1P24310 79 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 RGRP47804 291 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 CDH4P55283 916 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 GNB2P62879 340 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 BEX3Q00994 111 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 TLE4Q04727 773 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ACVR1Q04771 509 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 REG3AQ06141 175 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 MRPL28Q13084 256 aaKnown RBP2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 MICBQ29980 383 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 PARP15Q460N3 678 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 C6orf226Q5I0X4 101 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 C1orf100Q5SVJ3 147 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 MARCH8Q5T0T0 291 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 TMIGD1Q6UXZ0 262 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 UTS2BQ765I0 119 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 TAS2R42Q7RTR8 314 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 H2BFWTQ7Z2G1 175 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 RALGPS2Q86X27 583 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 PSTKQ8IV42 348 aaKnown RBP2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 NUDCD3Q8IVD9 361 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRR22Q8IZ63 422 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 TPRX1Q8N7U7 411 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 C20orf203Q8NBC4 194 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR2L5Q8NG80 312 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR2L3Q8NG85 312 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR9K2Q8NGE7 335 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 RDH5Q92781 318 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 PHYHIPLQ96FC7 376 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 B3GALT6Q96L58 329 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZIM3Q96PE6 472 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 CNN2Q99439 309 aaKnown RBP2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 C20orf85Q9H1P6 137 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ANKRD19PQ9H560 264 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZDHHC11Q9H8X9 412 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 VPS37BQ9H9H4 285 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZFP14Q9HCL3 533 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 SH2D2AQ9NP31 389 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 NMRK1Q9NWW6 199 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 DCDC2Q9UHG0 476 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 NAP1L2Q9ULW6 460 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 FRMPD3Q5JV73 1810 aa2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 RAI1Q7Z5J4 1906 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P17-201ENST00000403495 A0A1W2PPE3 182 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 GOLGA8OA6NCC3 632 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 E9PBE3 544 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 GOLGA8NF8WBI6 632 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 TRAF3IP2O43734 574 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 OR7A10O76100 309 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 SNAPINO95295 136 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 C1orf105O95561 183 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 CT62P0C5K7 136 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 TOP1P11387 765 aaKnown RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 CASP14P31944 242 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 RFC4P35249 363 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 KPNA2P52292 529 aaKnown RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 RPL23AP62750 156 aaKnown RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 IRX3P78415 501 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 SCRN3Q0VDG4 424 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 ASPHQ12797 758 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 ARFRP1Q13795 201 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 NSDHLQ15738 373 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 GPR157Q5UAW9 335 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 PRAMEF20Q5VT98 475 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 ZNF620Q6ZNG0 422 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms