RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 SLC7A10Q9NS82 523 aa12.76□□□□□ -0.37
COL13A1-204ENST00000398975 FAM53CQ9NYF3 392 aa12.76□□□□□ -0.37
COL13A1-204ENST00000398975 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
COL13A1-204ENST00000398975 ITGB1BP2Q9UKP3 347 aa12.76□□□□□ -0.37
COL13A1-204ENST00000398975 PLEKHA6Q9Y2H5 1048 aa12.76□□□□□ -0.37
COL13A1-204ENST00000398975 TRAV36DV7A0A075B6V5 113 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.75□□□□□ -0.37
COL13A1-204ENST00000398975 M0R082 166 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 MRPL33O75394 65 aaKnown RBP12.75□□□□□ -0.37
COL13A1-204ENST00000398975 GOSR1O95249 250 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 HPRP00739 348 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 PLAUP00749 431 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ITGA5P08648 1049 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 PPP3CBP16298 524 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 GRPRP30550 384 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 KDELR2P33947 212 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 GSK3BP49841 420 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 IST1P53990 364 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 CYBRD1Q53TN4 286 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 TSPO2Q5TGU0 170 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ZNF613Q6PF04 617 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 NHLRC1Q6VVB1 395 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 CREB3L2Q70SY1 520 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 GPAT4Q86UL3 456 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 CARM1Q86X55 608 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 WDFY1Q8IWB7 410 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 STEAP2Q8NFT2 490 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ZNF417Q8TAU3 575 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 SLC26A7Q8TE54 656 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ADAMTS16Q8TE57 1224 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 KISS1RQ969F8 398 aaPredicted RBP12.75□□□□□ -0.37
COL13A1-204ENST00000398975 TMEM45BQ96B21 275 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ZNF587Q96SQ5 575 aaPredicted RBP12.75□□□□□ -0.37
COL13A1-204ENST00000398975 PRSS27Q9BQR3 290 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 SF3B5Q9BWJ5 86 aaKnown RBP12.75□□□□□ -0.37
COL13A1-204ENST00000398975 TAPBPLQ9BX59 468 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
COL13A1-204ENST00000398975 EVA1AQ9H8M9 152 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ARL8BQ9NVJ2 186 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ZNF226Q9NYT6 803 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 MALT1Q9UDY8 824 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 SLC9A8Q9Y2E8 581 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
COL13A1-204ENST00000398975 ELOVL7A1L3X0 281 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 CHP2O43745 196 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 CNOT4O95628 575 aaKnown RBP12.74□□□□□ -0.37
COL13A1-204ENST00000398975 IL32P24001 234 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 PRDX6P30041 224 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 OR1E2P47887 323 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 SELENOPP49908 381 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 PSME3P61289 254 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 FAPQ12884 760 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 LRRC23Q53EV4 343 aaPredicted RBP12.74□□□□□ -0.37
COL13A1-204ENST00000398975 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
COL13A1-204ENST00000398975 FAM69AQ5T7M9 428 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 FBXW10Q5XX13 1052 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 TMEM225Q6GV28 225 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 ALKBH2Q6NS38 261 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 PAMR1Q6UXH9 720 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 LINGO2Q7L985 606 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 SLC41A3Q96GZ6 507 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 HOPXQ9BPY8 73 aaPredicted RBP12.74□□□□□ -0.37
COL13A1-204ENST00000398975 TMEM43Q9BTV4 400 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 ZNF426Q9BUY5 554 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 HDHD5Q9BXW7 423 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 CCM2LQ9NUG4 571 aaPredicted RBP12.74□□□□□ -0.37
COL13A1-204ENST00000398975 ABCD2Q9UBJ2 740 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 SLC7A7Q9UM01 511 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 ARL2BPQ9Y2Y0 163 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 CELSR1Q9NYQ6 3014 aa12.74□□□□□ -0.37
COL13A1-204ENST00000398975 CADP27708 2225 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 ALPK2Q86TB3 2170 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 TRAPPC13A5PLN9 417 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 MS4A18H0YCH9 400 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 ATE1O95260 518 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 HLA-DOBP13765 273 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 MS4A18Q3C1V0 323 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 AAED1Q7RTV5 226 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 ARPINQ7Z6K5 226 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 VTCN1Q7Z7D3 282 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 UBE2J2Q8N2K1 259 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 PLPPR2Q96GM1 343 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 FANCFQ9NPI8 374 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 NPAP1Q9NZP6 1156 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 RASD1Q9Y272 281 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 SNX13Q9Y5W8 968 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 HIVEP1P15822 2718 aa12.73□□□□□ -0.37
COL13A1-204ENST00000398975 PRRC2AP48634 2157 aaKnown RBP12.72□□□□□ -0.37
COL13A1-204ENST00000398975 CXCR6O00574 342 aa12.72□□□□□ -0.37
COL13A1-204ENST00000398975 TRAF3IP2O43734 574 aaPredicted RBP12.72□□□□□ -0.37
COL13A1-204ENST00000398975 OR2T1O43869 369 aa12.72□□□□□ -0.37
COL13A1-204ENST00000398975 RAD51DO75771 328 aa12.72□□□□□ -0.37
COL13A1-204ENST00000398975 ZNF432O94892 652 aa12.72□□□□□ -0.37
COL13A1-204ENST00000398975 NCK1P16333 377 aa12.72□□□□□ -0.37
COL13A1-204ENST00000398975 PIN1Q13526 163 aaPredicted RBP12.72□□□□□ -0.37
COL13A1-204ENST00000398975 GABRA6Q16445 453 aa12.72□□□□□ -0.37
COL13A1-204ENST00000398975 BEX5Q5H9J7 111 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms