RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ANKRD19PQ9H560 264 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 MED17Q9NVC6 651 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 CYB5R1Q9UHQ9 305 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 GTF2A1LQ9UNN4 478 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 NPTNQ9Y639 398 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 DISC1C4P0D8 188 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 F5H5P2 479 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 CCSO14618 274 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 GALR3O60755 368 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 LILRB5O75023 590 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HIST1H2ABP04908 130 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 APEHP13798 732 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 NT5EP21589 574 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HIST1H1TP22492 207 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 ITPKBP27987 946 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HTR2AP28223 471 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 BCL6P41182 706 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 CCR2P41597 374 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 AP3S2P59780 193 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 UBE2NLQ5JXB2 153 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 MRPL2Q5T653 305 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 FAM69AQ5T7M9 428 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 MRM1Q6IN84 353 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HIST3H2AQ7L7L0 130 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OVCH2Q7RTZ1 564 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 PXKQ7Z7A4 578 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 CBLN2Q8IUK8 224 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OR6V1Q8N148 313 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 MUC20Q8N307 709 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OR7G2Q8NG99 324 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OR56A1Q8NGH5 318 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HAVCR2Q8TDQ0 301 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 IRF7Q92985 503 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HIST1H2ACQ93077 130 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF75AQ96N20 296 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 TSNAXQ99598 290 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF471Q9BX82 626 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 SAGE1Q9NXZ1 904 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OPN4Q9UHM6 478 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OR1A2Q9Y585 309 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 C4orf47A7E2U8 309 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PIN1P1O15428 100 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 FGF2P09038 288 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC35G4P0C7Q5 338 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 AK4P27144 223 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 LUMP51884 338 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 DLX5P56178 289 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 GMFBP60983 142 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TAF13Q15543 124 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 DUSP5Q16690 384 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 MPP7Q5T2T1 576 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 HACD4Q5VWC8 232 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 FAM199XQ6PEV8 388 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PXT1Q8NFP0 134 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 OR51S1Q8NGJ8 323 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNRF4Q8WWF5 429 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 HSPA12BQ96MM6 686 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PBX4Q9BYU1 374 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 OR52A5Q9H2C5 316 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 EXO5Q9H790 373 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ZMAT3Q9HA38 289 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 KRCC1Q9NPI7 259 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 NRIP3Q9NQ35 241 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 A0A0A6YYD5 115 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 IFITM5A6NNB3 132 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 GABARAPH6UMI1 98 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PRAF2O60831 178 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 RCBTB2O95199 551 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 GTF2F2P13984 249 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 FRKP42685 505 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TAS2R43P59537 309 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ST8SIA6P61647 398 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 BDH1Q02338 343 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 CDK5R1Q15078 307 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 MTSS1LQ765P7 747 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 DPPA4Q7L190 304 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 RANBP3LQ86VV4 465 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 OR2L2Q8NH16 312 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TSSK2Q96PF2 358 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 C7orf50Q9BRJ6 194 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 NKX6-2Q9C056 277 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 CMC2Q9NRP2 79 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TAS2R5Q9NYW4 299 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ACTR10Q9NZ32 417 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ST6GALNAC2Q9UJ37 374 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC35A3Q9Y2D2 325 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 IER3IP1Q9Y5U9 82 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PLXNB3Q9ULL4 1909 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TRAPPC13A5PLN9 417 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 SERPINA3P01011 423 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 SOD2P04179 222 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 RAG2P55895 527 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TNFRSF17Q02223 184 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TRMT12Q53H54 448 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF626Q68DY1 528 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 HAGHLQ6PII5 290 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 CDH26Q8IXH8 852 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms