RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MTSS1LQ765P7 747 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 OR51A7Q8NH64 312 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 GLYATL2Q8WU03 294 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEM239Q8WW34 195 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 THAP4Q8WY91 577 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 MS4A4EQ96PG1 132 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEM106CQ9BVX2 250 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 GPN1Q9HCN4 374 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 CLDND1Q9NY35 253 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF223Q9UK11 482 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 DENND4AQ7Z401 1863 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 SCN2AQ99250 2005 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 DNAH14Q0VDD8 3507 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 TRAPPC13A5PLN9 417 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 FAM86C2PA6NEL3 165 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 DUXAA6NLW8 204 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 CTDSPLO15194 276 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 CREBL2O60519 120 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 SERPINA3P01011 423 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 S100A8P05109 93 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 MST1P26927 711 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 MAPK3P27361 379 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 WASP42768 502 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 RAD52P43351 418 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 CENPAP49450 140 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 EEF1A1P68104 462 aaKnown RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 ID2Q02363 134 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF85Q03923 595 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 FAM78AQ5JUQ0 283 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 PGAP1Q75T13 922 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 SSX6Q7RTT6 188 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 PRSS45Q7RTY3 260 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 RANBP3LQ86VV4 465 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 LNX2Q8N448 690 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 RFLNBQ8N5W9 214 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 DMBX1Q8NFW5 382 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 OR10K1Q8NGX5 313 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 GHSRQ92847 366 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 PGLYRP3Q96LB9 341 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 ORAI3Q9BRQ5 295 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 PTDSS2Q9BVG9 487 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 GSDMCQ9BYG8 508 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 MYEF2Q9P2K5 600 aaKnown RBP14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 CAMK2AQ9UQM7 478 aa14.7□□□□□ -0.06
CHMP1A-201ENST00000397901 NAP1L6A6NFF2 107 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SLC22A31A6NKX4 558 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 DISC1C4P0D8 188 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ARPC1BO15143 372 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SC5DO75845 299 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PAK4O96013 591 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SBK2P0C263 348 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ATF1P18846 271 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 GDNFP39905 211 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ARFIP1P53367 373 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 HCCSP53701 268 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 CRMP1Q14194 572 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 OR1Q1Q15612 314 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ELFN2Q5R3F8 820 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEM88Q6PEY1 159 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 LRRN1Q6UXK5 716 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SVBPQ8N300 66 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 LRRC25Q8N386 305 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SMIM4Q8WVI0 70 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SMPDL3BQ92485 455 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PNPLA2Q96AD5 504 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PEX11GQ96HA9 241 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 TSNAXQ99598 290 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ADGRL4Q9HBW9 690 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 FBXO34Q9NWN3 711 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 MRPL15Q9P015 296 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 C2orf16Q68DN1 1984 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEM82A0PJX8 343 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 TBC1D3BA6NDS4 549 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 SULT1C2O00338 296 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF806P0C7X5 589 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF888P0CJ79 500 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 CCR9P51686 369 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 IRF4Q15306 451 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 CEBPEQ15744 281 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PAN3Q58A45 887 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 MRPL2Q5T653 305 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PXKQ7Z7A4 578 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 LDLRAD3Q86YD5 345 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 OR6K3Q8NGY3 331 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PIGKQ92643 395 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 HRASLSQ9HDD0 168 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PRSS16Q9NQE7 514 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 CMC2Q9NRP2 79 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 PCOLCE2Q9UKZ9 415 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 A0A0C4DFX4 3053 aa14.69□□□□□ -0.06
CHMP1A-201ENST00000397901 FXYD6-FXYD2A0A087WZ82 144 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 SNRPGP15A8MWD9 76 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 PEX12O00623 359 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 SPP1P10451 314 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 KCNJ3P48549 501 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 MAT1AQ00266 395 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 TP53I3Q53FA7 332 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF626Q68DY1 528 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ARL14Q8N4G2 192 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 SLC44A3Q8N4M1 653 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms