RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PNMA8BQ9ULN7 279 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SPATA2Q9UM82 520 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZGRF1Q86YA3 2104 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 CENPXA8MT69 81 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 C12orf71A8MTZ7 269 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 RENP00797 406 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 TUBG1P23258 451 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PITPNAQ00169 270 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 CBFBQ13951 182 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PRSS53Q2L4Q9 553 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 DUSP18Q8NEJ0 188 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 OR5D16Q8NGK9 328 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 OR8D4Q8NGM9 314 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 B4GALNT2Q8NHY0 566 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PTPMT1Q8WUK0 201 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SORBS1Q9BX66 1292 aaKnown RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 VN1R1Q9GZP7 353 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 WWTR1Q9GZV5 400 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ABCG5Q9H222 651 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 RNF122Q9H9V4 155 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 TUBG2Q9NRH3 451 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 TXNL4BQ9NX01 149 aaKnown RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PIEZO2Q9H5I5 2752 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 DAPL1A0PJW8 107 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF860A6NHJ4 632 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 CALCBP10092 127 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ALOX5APP20292 161 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 MYL9P24844 172 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 NOS3P29474 1203 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 GPR68Q15743 365 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 BCL2A1Q16548 175 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 RBP7Q96R05 134 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 IFT27Q9BW83 186 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 KCNE5Q9UJ90 142 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 IGHV5-51A0A0C4DH38 117 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 DIRAS1O95057 198 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ABCD3P28288 659 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 GPR4P46093 362 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SIRPAP78324 504 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 BNIP3Q12983 259 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SSX1Q16384 188 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 C1orf174Q8IYL3 243 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 BCORP1Q8N888 145 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 BMPERQ8N8U9 685 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 OR52I1Q8NGK6 324 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SNRNP27Q8WVK2 155 aaKnown RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PPP1R3EQ9H7J1 279 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 NDRG2Q9UN36 371 aaKnown RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SNX11Q9Y5W9 270 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 B4DGG1 531 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 FUT1P19526 365 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 EVX1P49640 407 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZXDAP98168 799 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PLAURQ03405 335 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 Q499Y3 187 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 KIRREL2Q6UWL6 708 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 CHRDL2Q6WN34 429 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 OR4D11Q8NGI4 311 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 OR5J2Q8NH18 312 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF721Q8TF20 911 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 LRRN3Q9H3W5 708 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ALKBH4Q9NXW9 302 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 C5AR2Q9P296 337 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PCNX3Q9H6A9 2034 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ISG15P05161 165 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 UBBP0CG47 229 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 UBCP0CG48 685 aaKnown RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 NTRK2Q16620 822 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 FAM220AQ7Z4H9 259 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 APCDD1LQ8NCL9 501 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 NEIL3Q8TAT5 605 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 MIB2Q96AX9 1013 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 KATNB1Q9BVA0 655 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 RSPO3Q9BXY4 272 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SYNPO2LQ9H987 977 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 MYOZ1Q9NP98 299 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 CAMK2AQ9UQM7 478 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 GLOD5A6NK44 160 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 B4GAT1O43505 415 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 AQP8O94778 261 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 RBMS1P29558 406 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PMELP40967 661 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 IL1RL1Q01638 556 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 GALNT5Q7Z7M9 940 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 HPS1Q92902 700 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 HGDQ93099 445 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PNPLA2Q96AD5 504 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ZG16BQ96DA0 208 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 GFM1Q96RP9 751 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ALG8Q9BVK2 526 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ETAA1Q9NY74 926 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 RHCGQ9UBD6 479 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 HEATR1Q9H583 2144 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PKD1L2Q7Z442 2459 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 FAM25AB3EWG3 89 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 FAM25CB3EWG5 89 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 FAM25GB3EWG6 89 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 RFXAPO00287 272 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 B3GALT4O96024 378 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms