RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SNX18Q96RF0 628 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 TTTY12Q9BZ98 90 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 VCX3AQ9NNX9 186 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 RASSF1Q9NS23 344 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 PAQR5Q9NXK6 330 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 PCNX3Q9H6A9 2034 aa17.14■□□□□ 0.34
TSPAN4-204ENST00000397404 LOC102725191A0A1B0GVB3 256 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 ZC3H12DA2A288 527 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 BLOC1S5-TXNDC5H3BN57 136 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 PRODHO43272 600 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 WBP4O75554 376 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 PIPP12273 146 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 MEOX1P50221 254 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 PLGLB1Q02325 96 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 TLE3Q04726 772 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 PMS2P3Q13401 168 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 TOMM20Q15388 145 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 INAQ16352 499 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 BCL2A1Q16548 175 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 NXNL2Q5VZ03 156 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC6A19Q695T7 634 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 TMPPEQ6ZT21 453 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 ESPNLQ6ZVH7 1005 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 GALNTL5Q7Z4T8 443 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 FAM109AQ8N4B1 249 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 TCEANCQ8N8B7 351 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 ANKK1Q8NFD2 765 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 CNIH3Q8TBE1 160 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 APH1BQ8WW43 257 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 MYDGFQ969H8 173 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 CHST11Q9NPF2 352 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 TIGARQ9NQ88 270 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 H2AFY2Q9P0M6 372 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 HRH3Q9Y5N1 445 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 MPDZO75970 2070 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 EML6Q6ZMW3 1958 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 ACACAQ13085 2346 aa17.14■□□□□ 0.33
TSPAN4-204ENST00000397404 A0A1W2PNV4 684 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 CLCA1A8K7I4 914 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 G3V3Y1 287 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 TLX2O43763 284 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 IGHMP01871 453 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 ITGB2P05107 769 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 IGFBP1P08833 259 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 GRPRP30550 384 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 SDHAP31040 664 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 GPR85P60893 370 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 LTBQ06643 244 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 RPL18Q07020 188 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 PUDPQ08623 228 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 MYBPHQ13203 477 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 PAQR6Q6TCH4 344 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 THSD4Q6ZMP0 1018 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 ADCK1Q86TW2 530 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 MEX3DQ86XN8 651 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 IQCF1Q8N6M8 205 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 OR4Q3Q8NH05 313 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC25A36Q96CQ1 311 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 KLHL15Q96M94 604 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 SFXN2Q96NB2 322 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 NAA11Q9BSU3 229 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 OR11A1Q9GZK7 315 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 DUSP21Q9H596 190 aa17.13■□□□□ 0.33
TSPAN4-204ENST00000397404 A0A0G2JMM0 328 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 A0A1W2PPB8 328 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 A0A1W2PRS3 328 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 TRIM64CA6NLI5 447 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 KIR3DP1A8MWS1 328 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 KDM4EB2RXH2 506 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 H3BML4 177 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PLPP3O14495 311 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 AHCYL1O43865 530 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 TRAPPC6AO75865 159 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 ADORA3P0DMS8 318 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PTNP21246 168 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 EEF1B2P24534 225 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 CENPAP49450 140 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 B3GALT5-AS1P59052 145 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 BLMHQ13867 455 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 KLHL22Q53GT1 634 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PXKQ7Z7A4 578 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 LRRC17Q8N6Y2 441 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 LRRC75AQ8NAA5 344 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 ZNF540Q8NDQ6 660 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 BPIFB6Q8NFQ5 453 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 LRR1Q96L50 414 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 ERMAPQ96PL5 475 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 INIPQ9NRY2 104 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 GRHPRQ9UBQ7 328 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 RPH3AQ9Y2J0 694 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PCDHGB5Q9Y5G0 923 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 DCHS1Q96JQ0 3298 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 APC2O95996 2303 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 A0A1W2PRG6 482 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 SULT2B1O00204 365 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 RNF13O43567 381 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 EFNA2O43921 213 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PRKYO43930 277 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 FAM20BO75063 409 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 CLPTM1O96005 669 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms