RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SHISA8B8ZZ34 492 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 CDC42EP2O14613 210 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 SLC19A2O60779 497 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 CH25HO95992 272 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 IGF2P01344 180 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 CHMP24386 653 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 GDF1P27539 372 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 SRD5A2P31213 254 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 PMP22Q01453 160 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 KRTAP21-3Q3LHN1 58 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 RAET1LQ5VY80 246 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 KRT80Q6KB66 452 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 GALNTL5Q7Z4T8 443 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 OAFQ86UD1 273 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 CHERPQ8IWX8 916 aaKnown RBP11.92□□□□□ -0.5
SEC13-209ENST00000397117 GTPBP8Q8N3Z3 284 aaPredicted RBP11.92□□□□□ -0.5
SEC13-209ENST00000397117 ATP6V1C2Q8NEY4 427 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 TEX47Q8TBZ9 253 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 STK35Q8TDR2 534 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 OSTF1Q92882 214 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 DDIT4LQ96D03 193 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
SEC13-209ENST00000397117 APOL4Q9BPW4 351 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 BATF3Q9NR55 127 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 RPH3AQ9Y2J0 694 aaPredicted RBP11.92□□□□□ -0.5
SEC13-209ENST00000397117 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 PINLYPA6NC86 204 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 ZNF208O43345 1280 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 HCN1O60741 890 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 TRAPPC6AO75865 159 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 OR7A10O76100 309 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 CLIC3O95833 236 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 GNAO1P09471 354 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 FUT1P19526 365 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 MYF6P23409 242 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 FKBP2P26885 142 aaKnown RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 EPHA2P29317 976 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 RPS5P46782 204 aaKnown RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 SLC9A3P48764 834 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 RPS6KA3P51812 740 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 SMSP52788 366 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 CASP6P55212 293 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 PLGLB1Q02325 96 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 EGR4Q05215 589 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 FOXO1Q12778 655 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 IL18R1Q13478 541 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 KEAP1Q14145 624 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 PDK3Q15120 406 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 PTGES3Q15185 160 aaKnown RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 GLYR1Q49A26 553 aaPredicted RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 C3orf33Q6P1S2 294 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 Q6ZPB1 254 aaPredicted RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 LSRQ86X29 649 aaPredicted RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 ACBD4Q8NC06 268 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 OR5M1Q8NGP8 315 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 OR14L1PQ8NHC6 308 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 POC1BQ8TC44 478 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 FANK1Q8TC84 345 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 KTI12Q96EK9 354 aaPredicted RBP11.91□□□□□ -0.5
SEC13-209ENST00000397117 C14orf79Q96F83 325 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 MUS81Q96NY9 551 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 NPAS1Q99742 590 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 PIGQQ9BRB3 760 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 EGLN3Q9H6Z9 239 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 NANSQ9NR45 359 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 TINAGQ9UJW2 476 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 ZNF337Q9Y3M9 751 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 CDH10Q9Y6N8 788 aa11.91□□□□□ -0.5
SEC13-209ENST00000397117 NAV3Q8IVL0 2385 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 ZIC3O60481 467 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 RCBTB2O95199 551 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 AHSA1O95433 338 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 CLDN14O95500 239 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 HIST1H2ABP04908 130 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 IGFBP1P08833 259 aaPredicted RBP11.9□□□□□ -0.5
SEC13-209ENST00000397117 TFPIP10646 304 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 ZNF17P17021 662 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 BMP7P18075 431 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 MEOX1P50221 254 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 NUP107P57740 925 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 SELENBP1Q13228 472 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 ZNF74Q16587 644 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 C1orf140Q5VVS0 124 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 RPL13AP3Q6NVV1 102 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 ZNF620Q6ZNG0 422 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 HIST3H2AQ7L7L0 130 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 KIF18BQ86Y91 864 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 CLDN22Q8N7P3 220 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 OR52L1Q8NGH7 329 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 SLC25A43Q8WUT9 341 aaPredicted RBP11.9□□□□□ -0.5
SEC13-209ENST00000397117 HIST1H2ACQ93077 130 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 TAAR8Q969N4 342 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 SCMH1Q96GD3 660 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 HRASLS5Q96KN8 279 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 SPOCK3Q9BQ16 436 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 TEX12Q9BXU0 123 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms