RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 OTOL1A6NHN0 477 aaPredicted RBP13.53□□□□□ -0.24
CCNF-202ENST00000397066 MCRIP1C9JLW8 97 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 SC5DO75845 299 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 RAB40ALP0C0E4 278 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 PEBP1P30086 187 aaKnown RBP13.53□□□□□ -0.24
CCNF-202ENST00000397066 ACTR1BP42025 376 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 ACTR1AP61163 376 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 CBFBQ13951 182 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 TMED4Q7Z7H5 227 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 ZNF454Q8N9F8 522 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 LHFPL5Q8TAF8 219 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 RAB40AQ8WXH6 277 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 MCCC2Q9HCC0 563 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 KCNE5Q9UJ90 142 aa13.53□□□□□ -0.24
CCNF-202ENST00000397066 MRPS10P82664 201 aaKnown RBP13.52□□□□□ -0.24
CCNF-202ENST00000397066 HLXQ14774 488 aaPredicted RBP13.52□□□□□ -0.24
CCNF-202ENST00000397066 KRT77Q7Z794 578 aa13.52□□□□□ -0.24
CCNF-202ENST00000397066 BMPERQ8N8U9 685 aa13.52□□□□□ -0.24
CCNF-202ENST00000397066 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.24
CCNF-202ENST00000397066 HAO2Q9NYQ3 351 aa13.52□□□□□ -0.24
CCNF-202ENST00000397066 CACNA1CQ13936 2221 aa13.52□□□□□ -0.24
CCNF-202ENST00000397066 TCRBV16S1A1N1A0A5B0 115 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 PYCARD-AS1I3L0S3 204 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 FGF17O60258 216 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 PPP3CBP16298 524 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 PSMD4P55036 377 aaKnown RBP13.52□□□□□ -0.25
CCNF-202ENST00000397066 SEC13P55735 322 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 PRRT3Q5FWE3 981 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 ENPP7Q6UWV6 458 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 ZNF227Q86WZ6 799 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 YAF2Q8IY57 180 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 MFFQ9GZY8 342 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 FBXL2Q9UKC9 423 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 TCF20Q9UGU0 1960 aaKnown RBP13.52□□□□□ -0.25
CCNF-202ENST00000397066 SCN2AQ99250 2005 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 TUBAL3A6NHL2 446 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 HLA-DQA2P01906 255 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 FBXO45P0C2W1 286 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 MAPK3P27361 379 aaPredicted RBP13.52□□□□□ -0.25
CCNF-202ENST00000397066 TAS2R20P59543 309 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 ANKRD33Q7Z3H0 272 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 GLB1L2Q8IW92 636 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 SLC35F3Q8IY50 421 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 OR5T3Q8NGG3 340 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 RSPRY1Q96DX4 576 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 CAPNS2Q96L46 248 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 C10orf90Q96M02 699 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 OR1F2PQ96R84 312 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 PDCD10Q9BUL8 212 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 DUSP22Q9NRW4 184 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 FOXJ3Q9UPW0 622 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 PCDHGA5Q9Y5G8 931 aa13.52□□□□□ -0.25
CCNF-202ENST00000397066 OR6C74A6NCV1 312 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 PTP4A3O75365 173 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 LPLP06858 475 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 HOXD4P09016 255 aaPredicted RBP13.51□□□□□ -0.25
CCNF-202ENST00000397066 HPGDP15428 266 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 PRKACAP17612 351 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 SLC2A5P22732 501 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 IL32P24001 234 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 SORDQ00796 357 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 LTBQ06643 244 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 RIPPLY1Q0D2K3 151 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 ILF3Q12906 894 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCNF-202ENST00000397066 FAM199XQ6PEV8 388 aaPredicted RBP13.51□□□□□ -0.25
CCNF-202ENST00000397066 SPICQ8N5J4 248 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 OR52R1Q8NGF1 315 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 OR5V1Q9UGF6 321 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 SERGEFQ9UGK8 458 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 TMEM72A0PK05 275 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 ZFPL1O95159 310 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 AK1P00568 194 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 MNDAP41218 407 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 GRK6P43250 576 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 DIO1P49895 249 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 EMDP50402 254 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 ELFN2Q5R3F8 820 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 YOD1Q5VVQ6 348 aaPredicted RBP13.51□□□□□ -0.25
CCNF-202ENST00000397066 ZAR1Q86SH2 424 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 THEM6Q8WUY1 208 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 MYADMQ96S97 322 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 FLRT3Q9NZU0 649 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 NTMQ9P121 344 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 TRAV18A0A075B6X5 111 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 SULT1B1O43704 296 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 SUSD5O60279 629 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 SNAPC5O75971 98 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 CEACAM5P06731 702 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
CCNF-202ENST00000397066 RBMS2Q15434 407 aaKnown RBP13.51□□□□□ -0.25
CCNF-202ENST00000397066 NHLRC3Q5JS37 347 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 KIAA1324Q6UXG2 1013 aaKnown RBP13.51□□□□□ -0.25
CCNF-202ENST00000397066 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 USP53Q70EK8 1073 aa13.51□□□□□ -0.25
CCNF-202ENST00000397066 EID2Q8N6I1 236 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms