RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GSX1Q9H4S2 264 aaPredicted RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 NLE1Q9NVX2 485 aaPredicted RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 CXXC1Q9P0U4 656 aaPredicted RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 A0A0A6YYJ9 748 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 FAM227AF5H4B4 570 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 FBP1P09467 338 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 GABRB3P28472 473 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 GDF10P55107 478 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 SRYQ05066 204 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ABHD6Q9BV23 337 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 LHX6Q9UPM6 363 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 RFPL4AA6NLU0 287 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 RFPL4AL1F8VTS6 287 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 H7BY64 318 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ADAM23O75077 832 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 MTX2O75431 263 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 TAC4Q86UU9 113 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ANKRD36A6QL64 1941 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ADGRB3O60242 1522 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 AGLP35573 1532 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 SPATA31A3Q5VYP0 1347 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 SIM1P81133 766 aaPredicted RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP49-203ENST00000394253 GATSQ8NAP1 163 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 AK3Q9UIJ7 227 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 NDRG2Q9UN36 371 aaKnown RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 RCE1Q9Y256 329 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CPOXP36551 454 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 LRRC56Q8IYG6 542 aaPredicted RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 ABCC6O95255 1503 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 SPTAN1Q13813 2472 aaKnown RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 HBQ1P09105 142 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 TNFRSF17Q02223 184 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ID2Q02363 134 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 DGKZQ13574 1117 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CD276Q5ZPR3 534 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 OR8G2PQ6IF36 304 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ST8SIA4Q92187 359 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 FAM3CQ92520 227 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 KLK6Q92876 244 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 NECAP2Q9NVZ3 263 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 SLC38A8A6NNN8 435 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 VIPR2P41587 438 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 GDF5P43026 501 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CLDN8P56748 225 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 DAOAP59103 153 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 B3GNTL1Q67FW5 361 aaPredicted RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 FA2HQ7L5A8 372 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CLRN3Q8NCR9 226 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 LIPCP11150 499 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 GABREP78334 506 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 UBE3DQ7Z6J8 389 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 DVL3Q92997 716 aaPredicted RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 SLC43A1O75387 559 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 OR2J3O76001 311 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CNIH1O95406 144 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 ELOCQ15369 112 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 TPGS2Q68CL5 300 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CATSPERGQ6ZRH7 1159 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 CPOQ8IVL8 374 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 EIF4E3Q8N5X7 224 aaKnown RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 NXF5Q9H1B4 397 aaKnown RBP12.56□□□□□ -0.4
USP49-203ENST00000394253 SPO11Q9Y5K1 396 aa12.56□□□□□ -0.4
USP49-203ENST00000394253 IGHG1P01857 330 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 CHRM4P08173 479 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 TGM1P22735 817 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 PBX1P40424 430 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 CISD2Q8N5K1 135 aaKnown RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 RNF19AQ9NV58 838 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 HRASLS2Q9NWW9 162 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 C5orf52A6NGY3 159 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 FABP7O15540 132 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 CLDN7O95471 211 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 HEXAP06865 529 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 Q8N9G6 341 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 OR5A2Q8NGI9 324 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 IL37Q9NZH6 218 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 STATHP02808 62 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 DIO2Q92813 273 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 FBXW5Q969U6 566 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 CXorf49A8MYA2 514 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 PHF1O43189 567 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 BMI1P35226 326 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 RPL24P83731 157 aaKnown RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 LTB4RQ15722 352 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 C2orf27AQ580R0 203 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 ZNF691Q5VV52 312 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 KCNG3Q8TAE7 436 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 HSD17B14Q9BPX1 270 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 NOSIPQ9Y314 301 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms