RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RP2O75695 350 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 PET100P0DJ07 73 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 GRK1Q15835 563 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 CTU2Q2VPK5 515 aaKnown RBP15.29■□□□□ 0.04
SCN3B-202ENST00000392770 ANKRD34AQ69YU3 496 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-202ENST00000392770 PIGQQ9BRB3 760 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 WIF1Q9Y5W5 379 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 ALG5Q9Y673 324 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 OR6C76A6NM76 312 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 SNAPC5O75971 98 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 IGFBP1P08833 259 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-202ENST00000392770 C9orf135Q5VTT2 229 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 CPNE5Q9HCH3 593 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 SMIM18P0DKX4 95 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 SF3A2Q15428 464 aaKnown RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 NKPD1Q17RQ9 610 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 C6orf15Q6UXA7 325 aaPredicted RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 SLC46A3Q7Z3Q1 461 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 TPRA1Q86W33 373 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 CSNK2A3Q8NEV1 391 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 MFSD8Q8NHS3 518 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 CLEC2DQ9UHP7 191 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 A8MVM7 634 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 SEC14L2O76054 403 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 TOXO94900 526 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 P2RX1P51575 399 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 RAB12Q6IQ22 244 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 LINC00696Q6ZRV3 163 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 BEND4Q6ZU67 534 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 PM20D2Q8IYS1 436 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 ESX1Q8N693 406 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 OR5M1Q8NGP8 315 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 GABARAPL3Q9BY60 117 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 EIF4E2O60573 245 aaKnown RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 FCMRO60667 390 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 MRPL33O75394 65 aaKnown RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 SIRPAP78324 504 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 CNN3Q15417 329 aaKnown RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 SF3B4Q15427 424 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 C1orf140Q5VVS0 124 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 ASB12Q8WXK4 309 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 FAIMQ9NVQ4 179 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 ZNFX1Q9P2E3 1918 aaKnown RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 A0A087WV62 115 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 K7EQS6 105 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 ATP6V1G1O75348 118 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 DDAH2O95865 285 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 ISL1P61371 349 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 CCDC74BQ96LY2 380 aa15.28■□□□□ 0.04
SCN3B-202ENST00000392770 TXNL4BQ9NX01 149 aaKnown RBP15.28■□□□□ 0.04
SCN3B-202ENST00000392770 GOSR2O14653 212 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 SELENOFO60613 162 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 DIRAS3O95661 229 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 CSF1P09603 554 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 DRD3P35462 400 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 SLC14A1Q13336 389 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM179BQ7Z7N9 219 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 SLC43A2Q8N370 569 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 FOXRED1Q96CU9 486 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-202ENST00000392770 SYT4Q9H2B2 425 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 NPFFR2Q9Y5X5 522 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 OR2A25A4D2G3 310 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 DNAJB6O75190 326 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 CD34P28906 385 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 MTFR2Q6P444 385 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 CNEP1R1Q8N9A8 125 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 CNRIP1Q96F85 164 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-202ENST00000392770 SLC6A13Q9NSD5 602 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 TMPRSS11EQ9UL52 423 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 ARID2Q68CP9 1835 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 STK11Q15831 433 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 LRRC28Q86X40 367 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-202ENST00000392770 MNTQ99583 582 aa15.27■□□□□ 0.04
SCN3B-202ENST00000392770 IRF2P14316 349 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 PCBD1P61457 104 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 NUBP2Q9Y5Y2 271 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 ANKRD30BLA7E2S9 258 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 DNASE1P24855 282 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 PLCXD3Q63HM9 321 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 ADGRF3Q8IZF5 1079 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 LRRC20Q8TCA0 184 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 ST6GALNAC5Q9BVH7 336 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 C12orf4Q9NQ89 552 aa15.27■□□□□ 0.03
SCN3B-202ENST00000392770 TRIP12Q14669 1992 aaPredicted RBP15.27■□□□□ 0.03
SCN3B-202ENST00000392770 A0A087WUU8 490 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ACOD1A6NK06 481 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 TMEM212A6NML5 194 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 H7C417 338 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 CTDSP2O14595 271 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 MBTPS2O43462 519 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ICOSLGO75144 302 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 HRGP04196 525 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 BMP4P12644 408 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 NPR2P20594 1047 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 MAKP20794 623 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 EIF1P41567 113 aaKnown RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 LTBQ06643 244 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 COL28A1Q2UY09 1125 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ADAMTS14Q8WXS8 1223 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms