RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FGF17O60258 216 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 OPN1SWP03999 348 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 FOLR1P15328 257 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 MC3RP41968 323 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 NUDT6P53370 316 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 KCNJ10P78508 379 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 PLA1AQ53H76 456 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 AADACL4Q5VUY2 407 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 OLIG3Q7RTU3 272 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 LDLRAD3Q86YD5 345 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 PLXDC1Q8IUK5 500 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 ZDHHC21Q8IVQ6 265 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 LYRM4Q9HD34 91 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 ZCCHC3Q9NUD5 404 aaKnown RBP17.45■□□□□ 0.38
CCDC50-202ENST00000392456 MED11Q9P086 117 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 CORO2BQ9UQ03 480 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 A0A1W2PQM1 296 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 HYKKA2RU49 373 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 PRAMEF27A3QJZ7 478 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 H3BMH7 237 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF10P21506 573 aaPredicted RBP17.44■□□□□ 0.38
CCDC50-202ENST00000392456 LCN1P31025 176 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 SLC1A3P43003 542 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 GCNT6Q5T4J0 391 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF527Q8NB42 609 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 C11orf65Q8NCR3 313 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 OR14A16Q8NHC5 309 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 C9orf43Q8TAL5 461 aaPredicted RBP17.44■□□□□ 0.38
CCDC50-202ENST00000392456 C16orf58Q96GQ5 468 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 MS4A3Q96HJ5 214 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 DUSP23Q9BVJ7 150 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 RSPO3Q9BXY4 272 aaPredicted RBP17.44■□□□□ 0.38
CCDC50-202ENST00000392456 TAS2R16Q9NYV7 291 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 CLCA2Q9UQC9 943 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF780BQ9Y6R6 833 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 PHYHO14832 338 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 MPIP34949 423 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 VEZF1Q14119 521 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 KLBQ86Z14 1044 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 OR2M2Q96R28 347 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 CRLF2Q9HC73 371 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 C11orf16Q9NQ32 467 aa17.44■□□□□ 0.38
CCDC50-202ENST00000392456 TMEM238LA0A1B0GVL6 79 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 HMGN4O00479 90 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 GPR171O14626 319 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 CDC123O75794 336 aaPredicted RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 CNR2P34972 360 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 HSD11B2P80365 405 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 ST3GAL4Q11206 333 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SCARB2Q14108 478 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 MED22Q15528 200 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 DHRS7BQ6IAN0 325 aaPredicted RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SLC23A3Q6PIS1 610 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 WDR53Q7Z5U6 358 aaPredicted RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 CBLN2Q8IUK8 224 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 RNF113BQ8IZP6 322 aaKnown RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 OR4K14Q8NGD5 310 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 POP5Q969H6 163 aaKnown RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 CD180Q99467 661 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 ARRDC1-AS1Q9H2J1 176 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 R4GN57 208 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 STX11O75558 287 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 HMGN2P05204 90 aaKnown RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SYPP08247 313 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SULT1A3P0DMM9 295 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SULT1A4P0DMN0 295 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 PCGF2P35227 344 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 CCL7P80098 99 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 CDK6Q00534 326 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 GK2Q14410 553 aaPredicted RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 P2RY14Q15391 338 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 NR0B2Q15466 257 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 RPS26P11Q5JNZ5 115 aaPredicted RBP17.43■□□□□ 0.38
CCDC50-202ENST00000392456 ALKAL2Q6UX46 152 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 PDZD9Q8IXQ8 264 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 RCBTB1Q8NDN9 531 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SLC38A5Q8WUX1 472 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 SOX7Q9BT81 388 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 HHATLQ9HCP6 504 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 MS4A12Q9NXJ0 267 aa17.43■□□□□ 0.38
CCDC50-202ENST00000392456 OR6C68A6NDL8 312 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 TMEM150CB9EJG8 249 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 OR12D1P0DN82 309 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 TLX1P31314 330 aaPredicted RBP17.42■□□□□ 0.38
CCDC50-202ENST00000392456 CRYBB2P43320 205 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 NPRL3Q12980 569 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 HNRNPA0Q13151 305 aaKnown RBP17.42■□□□□ 0.38
CCDC50-202ENST00000392456 COTL1Q14019 142 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 LASP1Q14847 261 aaKnown RBP17.42■□□□□ 0.38
CCDC50-202ENST00000392456 OR2T5Q6IEZ7 315 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 ARRDC1Q8N5I2 433 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 CLDN22Q8N7P3 220 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 OR7G2Q8NG99 324 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 OR2T29Q8NH02 315 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 OR1L3Q8NH93 324 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 RNASE11Q8TAA1 199 aaKnown RBP17.42■□□□□ 0.38
CCDC50-202ENST00000392456 TMEM38AQ9H6F2 299 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 KCNE3Q9Y6H6 103 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 TCAPO15273 167 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 RPP30P78346 268 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms