RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 UFD1Q92890 307 aa2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 CXorf40BQ96DE9 158 aa2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 SLC38A2Q96QD8 506 aa2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 OR2M2Q96R28 347 aa2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 CHRDL1Q9BU40 450 aa2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 POLE4Q9NR33 117 aa2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 PRG3Q9Y2Y8 225 aaPredicted RBP2.85□□□□□ -1.95
SNORA40.2-201ENST00000390847 C15orf38-AP3S2A0A0A6YYH1 394 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 MOSP00540 346 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 DBTP11182 482 aaKnown RBP2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 IL12AP29459 219 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 CCR1P32246 355 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 NCBP1Q09161 790 aaKnown RBP2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 EIF4EBP2Q13542 120 aaPredicted RBP2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 PDK3Q15120 406 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 DUSP7Q16829 419 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 EXOC3L2Q2M3D2 409 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 KLHL38Q2WGJ6 581 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 PDZK1Q5T2W1 519 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 OR4F3Q6IEY1 312 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 ZSCAN25Q6NSZ9 544 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 PMF1Q6P1K2 205 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 Q6ZPB1 254 aaPredicted RBP2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 MFSD9Q8NBP5 474 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 IPMKQ8NFU5 416 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 OR52H1Q8NGJ2 320 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 OR51G1Q8NGK1 321 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 OR6X1Q8NH79 312 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 TRIM44Q96DX7 344 aaPredicted RBP2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 FCRL1Q96LA6 429 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 NPAS2Q99743 824 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 QPCTLQ9NXS2 382 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 KLK12Q9UKR0 248 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 SLC25A15Q9Y619 301 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 WSB1Q9Y6I7 421 aa2.84□□□□□ -1.95
SNORA40.2-201ENST00000390847 A0A0G2JLM5 398 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 ZNF208O43345 1280 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 RAMP3O60896 148 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 IGKV3-11P04433 115 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 NCK1P16333 377 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 CMA1P23946 247 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 DDOSTP39656 456 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 GRIA1P42261 906 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 LRRC63Q05C16 580 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 VGLL4Q14135 290 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 SFT2D3Q587I9 215 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 Q6P435 159 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 UTS2BQ765I0 119 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 COX15Q7KZN9 410 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 ZNF546Q86UE3 836 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 MDS2Q8NDY4 140 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 STEAP2Q8NFT2 490 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 ACER1Q8TDN7 264 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 FAM104AQ969W3 186 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 ITCHQ96J02 903 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 YY1AP1Q9H869 796 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 GORASP2Q9H8Y8 452 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 EML4Q9HC35 981 aaKnown RBP2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 MYOZ2Q9NPC6 264 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 CDH9Q9ULB4 789 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 PDS5BQ9NTI5 1447 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 GTF3C1Q12789 2109 aa2.83□□□□□ -1.96
SNORA40.2-201ENST00000390847 IGLV3-16A0A075B6K0 115 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 A0A0G2JN53 185 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 NKX2-6A6NCS4 301 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 GPR89AB7ZAQ6 455 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 KRTAP4-16G5E9R7 235 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 PRKAB2O43741 272 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 TOM1O60784 492 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 SNNO75324 88 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 SLC25A27O95847 323 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 PCCAP05165 728 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 GPR89BP0CG08 455 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 CRISP2P16562 243 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 ZNF32P17041 273 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 GLRA2P23416 452 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 CCT3P49368 545 aaKnown RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 LHX2P50458 406 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 ATP1B3P54709 279 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 OR5I1Q13606 314 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 CYTH1Q15438 398 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 LRRC23Q53EV4 343 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 LRRC10Q5BKY1 277 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 CTRB2Q6GPI1 263 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 ECHDC2Q86YB7 292 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 FNDC5Q8NAU1 212 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 CCDC54Q8NEL0 328 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 OR52M1Q8NGK5 317 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 SRSF12Q8WXF0 261 aaKnown RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 TM4SF19Q96DZ7 209 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 RNF185Q96GF1 192 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 COQ2Q96H96 371 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 OXGR1Q96P68 337 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 COPS8Q99627 209 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 TMEM246Q9BRR3 403 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 TMEM43Q9BTV4 400 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 CAPS2Q9BXY5 557 aa2.82□□□□□ -1.96
SNORA40.2-201ENST00000390847 VCX2Q9H322 139 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms