RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ZNF593O00488 134 aaPredicted RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 FOXC1Q12948 553 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 MRPL21Q7Z2W9 205 aaKnown RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 Q8N402 240 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 TSPAN10Q9H1Z9 355 aaPredicted RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 DPAGT1Q9H3H5 408 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 NUFIP1Q9UHK0 495 aaKnown RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 PCM1Q15154 2024 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 C5orf51A6NDU8 294 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 M0R082 166 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 APLNRP35414 380 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF45Q02386 682 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 HBMQ6B0K9 141 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF417Q8TAU3 575 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 HMGCLL1Q8TB92 370 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF587Q96SQ5 575 aaPredicted RBP12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 POLE4Q9NR33 117 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 PRKYO43930 277 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 TBCEQ15813 527 aaPredicted RBP12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 OCLNQ16625 522 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC16A14Q7RTX9 510 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 MSRB3Q8IXL7 192 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 CCDC54Q8NEL0 328 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 NDNFQ8TB73 568 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 TAAR9Q96RI9 348 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF639Q9UID6 485 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 NOSIPQ9Y314 301 aaKnown RBP12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 WIF1Q9Y5W5 379 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 SESN1Q9Y6P5 492 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 A0A1W2PQL4 384 aaPredicted RBP12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 H3BMQ9 156 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC43A1O75387 559 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 IGHV3-9P01782 118 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 PUDPQ08623 228 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 PWWP2BQ6NUJ5 590 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 FCAMRQ8WWV6 532 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 RPL3LQ92901 407 aaKnown RBP12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 RFT1Q96AA3 541 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 COG8Q96MW5 612 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF582Q96NG8 517 aaPredicted RBP12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 DOCK6Q96HP0 2047 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 TRAV6A0A075B6T7 132 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC19A2O60779 497 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 OR7A10O76100 309 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ENPP1P22413 925 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 EVI2BP34910 448 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 GLP1RP43220 463 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 RAB11BQ15907 218 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 LINC00346Q8IVM7 164 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 ZADH2Q8N4Q0 377 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 RHOXF1Q8NHV9 184 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 FAM86C1Q9NVL1 165 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 PARPBPQ9NWS1 579 aa12.04□□□□□ -0.48
PTPRN2-202ENST00000389416 GTF2F2P13984 249 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC2A5P22732 501 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 FXYD6P3P58550 94 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 GABREP78334 506 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 ECH1Q13011 328 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 DPY19L2P2Q6ZN68 376 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 OR4C3Q8NH37 302 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 MED17Q9NVC6 651 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 HHLA2Q9UM44 414 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 RLFQ13129 1914 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC16A6O15403 523 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 DOK2O60496 412 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 EIF1BO60739 113 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 MRPS14O60783 128 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 TFAP2AP05549 437 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 GRK5P34947 590 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 DEFB109BQ30KR1 87 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 SLX4IPQ5VYV7 408 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 CLCC1Q96S66 551 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 WWTR1Q9GZV5 400 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 MRPL15Q9P015 296 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 ADAM18Q9Y3Q7 739 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 PTHP01270 115 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 CCL4P13236 92 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 PITPNBP48739 271 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 STARP49675 285 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 IL11RAQ14626 422 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 TRIP6Q15654 476 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 AWAT2Q6E213 333 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 C3orf33Q6P1S2 294 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 H1FNTQ75WM6 255 aaPredicted RBP12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 DEFB127Q9H1M4 99 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF442Q9H7R0 627 aa12.03□□□□□ -0.48
PTPRN2-202ENST00000389416 TCRBV5S2A0A599 114 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 MEGF11A6BM72 1044 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 ART1P52961 327 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 PNLIPRP2P54317 469 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 NXNL2Q5VZ03 156 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 GDPGP1Q6ZNW5 385 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 PM20D2Q8IYS1 436 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 GOT1L1Q8NHS2 421 aaPredicted RBP12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 TRMT10AQ8TBZ6 339 aaKnown RBP12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 ITFG2Q969R8 447 aa12.02□□□□□ -0.48
PTPRN2-202ENST00000389416 ZG16BQ96DA0 208 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms