RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TXNL1O43396 289 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 NTN1O95631 604 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 TGM6O95932 706 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 WNT1P04628 370 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 IFNGR1P15260 489 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 CDK2P24941 298 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC6A1P30531 599 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 TAS2R19P59542 299 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 Q499Y3 187 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC6A19Q695T7 634 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 ACBD4Q8NC06 268 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC17A9Q9BYT1 436 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 RNGTTO60942 597 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 AMY2BP19961 511 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 ADH6P28332 368 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 C1orf61Q13536 156 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 CLVS2Q5SYC1 327 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 STEAP1BQ6NZ63 245 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR4D11Q8NGI4 311 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 RASD2Q96D21 266 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 INTS14Q96SY0 518 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZFYVE21Q9BQ24 234 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 CMC2Q9NRP2 79 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 DNMT3BQ9UBC3 853 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR51B4Q9Y5P0 310 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 C2orf74A8MZ97 194 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 PAPLNO95428 1278 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 KNG1P01042 644 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 PET100P0DJ07 73 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 CTSAP10619 480 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 TPT1P13693 172 aaKnown RBP12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 ATF1P18846 271 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 RAB3AP20336 220 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC2A5P22732 501 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 RGS19P49795 217 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 DEFB103AP81534 67 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 USF2Q15853 346 aaPredicted RBP12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 ANKRD53Q8N9V6 530 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR8D4Q8NGM9 314 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 MCCC2Q9HCC0 563 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPATCH2Q9NW75 528 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 POMT2Q9UKY4 750 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 CBLCQ9ULV8 474 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 ADAM18Q9Y3Q7 739 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 COL4A5P29400 1685 aa12.15□□□□□ -0.47
TRAPPC9-201ENST00000389328 A0A0B4J2A0 478 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 A0A0D9SG52 128 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 D6RAR5 112 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 SCGNO76038 276 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 EPXP11678 715 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 MAP2K6P52564 334 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 CNRIP1Q96F85 164 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 ELOVL3Q9HB03 270 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 BCL2L10Q9HD36 194 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 SHPKQ9UHJ6 478 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 INSL6Q9Y581 213 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 CCDC85CA6NKD9 419 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 KDM4EB2RXH2 506 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 RNH1P13489 461 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 RASGEF1BQ0VAM2 473 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 IRF4Q15306 451 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 NKAPLQ5M9Q1 402 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 LCN10Q6JVE6 187 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 VN1R2Q8NFZ6 395 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 EPHX3Q9H6B9 360 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPR55Q9Y2T6 319 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 SIPA1L1O43166 1804 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 IGLV3-16A0A075B6K0 115 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 ERCC1P07992 297 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF28P17035 718 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 TNK1Q13470 666 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 AMER3Q8N944 861 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 PCM1Q15154 2024 aa12.14□□□□□ -0.47
TRAPPC9-201ENST00000389328 LANCL1O43813 399 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SNAPINO95295 136 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 HOXB2P14652 356 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 DYRK1AQ13627 763 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 CBFBQ13951 182 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 TMEM64Q6YI46 380 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 PXKQ7Z7A4 578 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZFP82Q8N141 532 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 RBP7Q96R05 134 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SDHCQ99643 169 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 RNF32Q9H0A6 362 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 EMC3Q9P0I2 261 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRODH2Q9UF12 536 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ICKQ9UPZ9 632 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPR89AB7ZAQ6 455 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF208O43345 1280 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 FBXO24O75426 580 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms