RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SLC1A2P43004 574 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RECQLP46063 649 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 DEFA1P59665 94 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 IL2P60568 153 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SRP54P61011 504 aaKnown RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HERVK_113P63132 956 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ERVK-8P63133 956 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ERVK-25P63136 954 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RALGDSQ12967 914 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ERCC8Q13216 396 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PPA1Q15181 289 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 DEFB135Q30KP9 77 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 UNC50Q53HI1 259 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 FGD3Q5JSP0 725 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SH2D4BQ5SQS7 431 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GPRC6AQ5T6X5 926 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TMEM270Q6UE05 265 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TMEM205Q6UW68 189 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PRSS55Q6UWB4 352 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 FAM131AQ6UXB0 335 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 BTNL3Q6UXE8 466 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TPRG1Q6ZUI0 275 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 C11orf57Q6ZUT1 292 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 LINC00173Q6ZV60 143 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CALHM1Q8IU99 346 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PSTKQ8IV42 348 aaKnown RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CCDC28AQ8IWP9 274 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 MCEMP1Q8IX19 187 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SKA3Q8IX90 412 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SCYL3Q8IZE3 742 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ARHGAP24Q8N264 748 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RPRMLQ8N4K4 120 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR1M1Q8NGA1 313 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR5T3Q8NGG3 340 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ANGPTL6Q8NI99 470 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SCFD1Q8WVM8 642 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CORO2AQ92828 525 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GRAMD1AQ96CP6 724 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 QKIQ96PU8 341 aaKnown RBP eCLIP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PARK7Q99497 189 aaKnown RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HIST1H4GQ99525 98 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ERVK-6Q9BXR3 956 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 NUF2Q9BZD4 464 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GANQ9H2C0 597 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 UNC45AQ9H3U1 944 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RNF41Q9H4P4 317 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RPAP3Q9H6T3 665 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SYNDIG1Q9H7V2 258 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ROPN1Q9HAT0 212 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PRSS16Q9NQE7 514 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 RPRD1BQ9NQG5 326 aaKnown RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ASAH2Q9NR71 780 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 THAP1Q9NVV9 213 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ALKBH4Q9NXW9 302 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 LUZP4Q9P127 313 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ERVK-18Q9QC07 812 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PISDQ9UG56 409 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PCYOX1Q9UHG3 505 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 BARX2Q9UMQ3 279 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CHKBQ9Y259 395 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SNX13Q9Y5W8 968 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 WASHC2AQ641Q2 1341 aa-3.01□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PLEKHD1A6NEE1 506 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TCP10L2B9ZVM9 353 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 F5H5T6 163 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TEX46H3BTG2 121 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PEX7O00628 323 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR7C2O60412 319 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 TPST2O60704 377 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 BCAS1O75363 584 aaPredicted RBP-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 LALBAP00709 142 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 JCHAINP01591 159 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 BCHEP06276 602 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HEXAP06865 529 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HSPA1AP0DMV8 641 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 HSPA1BP0DMV9 641 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PSMB9P28065 219 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PCK1P35558 622 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ACAA2P42765 397 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 PRLHRP49683 370 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 BRD3Q15059 726 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ZNF726P1Q15940 193 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 STX1AQ16623 288 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CA9Q16790 459 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 CYP51A1Q16850 503 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 SMU1Q2TAY7 513 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 UGT3A2Q3SY77 523 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 C1orf141Q5JVX7 400 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 DNM1P46Q6ZS02 220 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 MIER3Q7Z3K6 550 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 LRRTM4Q86VH4 590 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 COMMD2Q86X83 199 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 GALNT13Q8IUC8 556 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 LINS1Q8NG48 757 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 OR9A4Q8NGU2 314 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 COG1Q8WTW3 980 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 IL1F10Q8WWZ1 152 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 ASB13Q8WXK3 278 aa-3.02□□□□□ -2.89
RNU6-1340P-201ENST00000384438 EEF1AKMT3Q96AZ1 226 aa-3.02□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms