RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 NPIPB7O75200 414 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 KRT33AO76009 404 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 LGI1O95970 557 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 MST1LQ2TV78 715 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 TBRG1Q3YBR2 411 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 PRAMEF8Q5VWM4 474 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 PRAMEF7Q5VXH5 474 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 CREB3L2Q70SY1 520 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 MAVSQ7Z434 540 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 ABHD12BQ7Z5M8 362 aaPredicted RBP14.71□□□□□ -0.05
SMN2-201ENST00000380741 OR9I1Q8NGQ6 314 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 OR1K1Q8NGR3 316 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 C3orf49Q96BT1 292 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 FBXO17Q96EF6 278 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 RMND5AQ9H871 391 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 OBP2BQ9NPH6 170 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 SDR39U1Q9NRG7 319 aaPredicted RBP14.71□□□□□ -0.05
SMN2-201ENST00000380741 TMEM45AQ9NWC5 275 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 ZIM2Q9NZV7 527 aa14.71□□□□□ -0.05
SMN2-201ENST00000380741 A0A096LPI6 279 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 A0A0G2JPF8 293 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 TMEM229AB2RXF0 380 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 HNRNPCL2B2RXH8 293 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 HNRNPCL3B7ZW38 293 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 HNRNPCL1O60812 293 aaKnown RBP14.7□□□□□ -0.06
SMN2-201ENST00000380741 VAMP5O95183 116 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 CSF3P09919 207 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 HNRNPCL4P0DMR1 293 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 ZSWIM7Q19AV6 140 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 SWI5Q1ZZU3 235 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 C6orf10Q5SRN2 563 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 ATG16L1Q676U5 607 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 MSANTD1Q6ZTZ1 278 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 LINGO2Q7L985 606 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 EPHX4Q8IUS5 362 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 PROX1Q92786 737 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 ITCHQ96J02 903 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 SLC38A2Q96QD8 506 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 OR52B2Q96RD2 323 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 SPATA9Q9BWV2 254 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 CDC42EP3Q9UKI2 254 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 ZNF232Q9UNY5 417 aa14.7□□□□□ -0.06
SMN2-201ENST00000380741 TMEM247A6NEH6 219 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 FTCDNL1E5RQL4 147 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 UPK3AO75631 287 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 AHSA1O95433 338 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 F12P00748 615 aaPredicted RBP14.69□□□□□ -0.06
SMN2-201ENST00000380741 NUDT7P0C024 238 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 FAM157CP0CG43 387 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 ZNF16P17020 682 aaPredicted RBP14.69□□□□□ -0.06
SMN2-201ENST00000380741 POLR2JP52435 117 aaKnown RBP14.69□□□□□ -0.06
SMN2-201ENST00000380741 HOXC5Q00444 222 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 NIPAL3Q6P499 406 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 PHC2Q8IXK0 858 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 STK35Q8TDR2 534 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 MAL2Q969L2 176 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 SORCS2Q96PQ0 1159 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 KCNK17Q96T54 332 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 PTDSS2Q9BVG9 487 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 ARMC7Q9H6L4 198 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 CACYBPQ9HB71 228 aaKnown RBP14.69□□□□□ -0.06
SMN2-201ENST00000380741 CA10Q9NS85 328 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 THUMPD1Q9NXG2 353 aaKnown RBP14.69□□□□□ -0.06
SMN2-201ENST00000380741 RASD1Q9Y272 281 aa14.69□□□□□ -0.06
SMN2-201ENST00000380741 A0A096LPE4 126 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 A0A1W2PPZ6 126 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 OR6C65A6NJZ3 312 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 NR5A2O00482 541 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 UBDO15205 165 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 IGHV4-31P0DP07 118 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 PNMTP11086 282 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 USF1P22415 310 aaPredicted RBP14.68□□□□□ -0.06
SMN2-201ENST00000380741 UBE2NP61088 152 aaKnown RBP14.68□□□□□ -0.06
SMN2-201ENST00000380741 SNRPD2P62316 118 aaKnown RBP14.68□□□□□ -0.06
SMN2-201ENST00000380741 TUBA1BP68363 451 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 TUBA4AP68366 448 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 EGR4Q05215 589 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 ZNF311Q5JNZ3 666 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 CYB5R2Q6BCY4 276 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 TUBA1AQ71U36 451 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 KDM8Q8N371 416 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 MFSD8Q8NHS3 518 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 BCL2L2Q92843 193 aaPredicted RBP14.68□□□□□ -0.06
SMN2-201ENST00000380741 SLC25A36Q96CQ1 311 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 KCNS3Q9BQ31 491 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 KATNB1Q9BVA0 655 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 NELFAQ9H3P2 528 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 BCL2L10Q9HD36 194 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 SEC14L4Q9UDX3 406 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 IFT52Q9Y366 437 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 PCDHB14Q9Y5E9 798 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 FKBP7Q9Y680 259 aa14.68□□□□□ -0.06
SMN2-201ENST00000380741 ARPC4-TTLL3A0A0A6YYG9 625 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 CRYAAP02489 173 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 SERPINF1P36955 418 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 RPS5P46782 204 aaKnown RBP14.67□□□□□ -0.06
SMN2-201ENST00000380741 SLC18A1P54219 525 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 MAGOHP61326 146 aaKnown RBP14.67□□□□□ -0.06
SMN2-201ENST00000380741 RGNQ15493 299 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 MIER2Q8N344 545 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms