RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ICAM2P13598 275 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 MAKP20794 623 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 CD79BP40259 229 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 RPS27AP62979 156 aaKnown RBP14.89□□□□□ -0.03
COL2A1-202ENST00000380518 UBA52P62987 128 aaKnown RBP14.89□□□□□ -0.03
COL2A1-202ENST00000380518 FOXK2Q01167 660 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 C14orf28Q4W4Y0 310 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 FAM71E1Q6IPT2 247 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 SFXN4Q6P4A7 337 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 SLC16A14Q7RTX9 510 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 CPT1CQ8TCG5 803 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 METTL17Q9H7H0 456 aaPredicted RBP14.89□□□□□ -0.03
COL2A1-202ENST00000380518 TOPAZ1Q8N9V7 1692 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 DOT1LQ8TEK3 1739 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 SLC22A23A1A5C7 686 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 ADAM23O75077 832 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 SCRG1O75711 98 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 CRYZL1O95825 349 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 ITGB8P26012 769 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 CSNK1G2P78368 415 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 SLX4IPQ5VYV7 408 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 LCORQ96JN0 433 aaPredicted RBP14.89□□□□□ -0.03
COL2A1-202ENST00000380518 OR14A2Q96R54 314 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 SMIM3Q9BZL3 60 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 GCM1Q9NP62 436 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 WIF1Q9Y5W5 379 aa14.89□□□□□ -0.03
COL2A1-202ENST00000380518 TRAV36DV7A0A075B6V5 113 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SURF4O15260 269 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 ABLIM3O94929 683 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 NFYAP23511 347 aaPredicted RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 HTR2CP28335 458 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 HOXD12P35452 270 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SYT6Q5T7P8 510 aaPredicted RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 FRMD1Q8N878 549 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 OR6T1Q8NGN1 323 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 PAQR8Q8TEZ7 354 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 NIPSNAP1Q9BPW8 284 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 OR51B6Q9H340 312 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 TUBB1Q9H4B7 451 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 WDR76Q9H967 626 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 CORINQ9Y5Q5 1042 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 A8MXE2 369 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SSX4O60224 188 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 CER1O95813 267 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 PRKACBP22694 351 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SHC1P29353 583 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 TMEM52BQ4KMG9 183 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 LGALS14Q8TCE9 139 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 FCRL1Q96LA6 429 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SLC46A1Q96NT5 459 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 NMNAT3Q96T66 252 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 MICU1Q9BPX6 476 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 TMEM59Q9BXS4 323 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 ZBP1Q9H171 429 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 RANGRFQ9HD47 186 aaPredicted RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SEMA4GQ9NTN9 838 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 TAS2R16Q9NYV7 291 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SLC34A2O95436 690 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 XKR7Q5GH72 579 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 PSMF1Q92530 271 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 PHYHIPQ92561 330 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 OR5M11Q96RB7 305 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 MKRN2Q9H000 416 aaKnown RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 LUZP4Q9P127 313 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 THAP10Q9P2Z0 257 aaPredicted RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 H7C1C5 153 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 IL2RGP31785 369 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 CASP3P42574 277 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 RPL35P42766 123 aaKnown RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 HTR5AP47898 357 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 CLDN12P56749 244 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 LCN6P62502 163 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 NKX6-1P78426 367 aaPredicted RBP14.88□□□□□ -0.03
COL2A1-202ENST00000380518 MC2RQ01718 297 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 MFSD12Q6NUT3 480 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 DPY19L2P2Q6ZN68 376 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 ADIPOR2Q86V24 386 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 SLC43A2Q8N370 569 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 OR4D6Q8NGJ1 314 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 PPA2Q9H2U2 334 aa14.88□□□□□ -0.03
COL2A1-202ENST00000380518 A0A0D9SG52 128 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 OR7C1O76099 320 aaPredicted RBP14.87□□□□□ -0.03
COL2A1-202ENST00000380518 LPLP06858 475 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 CHRNB1P11230 501 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 RPS18P62269 152 aaKnown RBP14.87□□□□□ -0.03
COL2A1-202ENST00000380518 MSMO1Q15800 293 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 ZNF674Q2M3X9 581 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 STEAP3Q658P3 488 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 IDO2Q6ZQW0 420 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 RFPL4BQ6ZWI9 263 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 GDF7Q7Z4P5 450 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SDHAF2Q9NX18 166 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 RAB6AP20340 208 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 GPLD1P80108 840 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SORDQ00796 357 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 C17orf67Q0P5P2 114 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 KCNJ8Q15842 424 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 NMNAT2Q9BZQ4 307 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 P2RY12Q9H244 342 aa14.87□□□□□ -0.03
COL2A1-202ENST00000380518 SNX11Q9Y5W9 270 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms