RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 PGLYRP3Q96LB9 341 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 LMF1Q96S06 567 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 DDOQ99489 341 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 HIF3AQ9Y2N7 669 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 U3KQA8 63 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 E9PI62 339 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 OGG1O15527 345 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 SSX4O60224 188 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 NCR1O76036 304 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 RPS5P46782 204 aaKnown RBP19.64■□□□□ 0.74
TRIM54-202ENST00000380075 GBX2P52951 348 aaPredicted RBP19.64■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF517Q6ZMY9 492 aaPredicted RBP19.64■□□□□ 0.74
TRIM54-202ENST00000380075 UBQLNLQ8IYU4 475 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 TSLPQ969D9 159 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 ZMYND19Q96E35 227 aaPredicted RBP19.64■□□□□ 0.74
TRIM54-202ENST00000380075 DEPDC7Q96QD5 511 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 UBL7Q96S82 380 aaPredicted RBP19.64■□□□□ 0.74
TRIM54-202ENST00000380075 NMNAT2Q9BZQ4 307 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 LAT2Q9GZY6 243 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF304Q9HCX3 659 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 SACM1LQ9NTJ5 587 aa19.64■□□□□ 0.74
TRIM54-202ENST00000380075 IMPA2O14732 288 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 TM4SF5O14894 197 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 LDOC1O95751 146 aaPredicted RBP19.64■□□□□ 0.73
TRIM54-202ENST00000380075 TMED10P49755 219 aaKnown RBP19.64■□□□□ 0.73
TRIM54-202ENST00000380075 E2F1Q01094 437 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 ZNF74Q16587 644 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 CDONQ4KMG0 1287 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 LSRQ86X29 649 aaPredicted RBP19.64■□□□□ 0.73
TRIM54-202ENST00000380075 SLC35F2Q8IXU6 374 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 ZNF321PQ8N8H1 164 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 TTYH2Q9BSA4 534 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 ST6GALNAC2Q9UJ37 374 aa19.64■□□□□ 0.73
TRIM54-202ENST00000380075 TO15178 435 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 PYCR1P32322 319 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 SLC3A1Q07837 685 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 TRIQKQ629K1 86 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 GATSQ8NAP1 163 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 DEFB124Q8NES8 71 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CLIP3Q96DZ5 547 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 DHCR7Q9UBM7 475 aaKnown RBP19.63■□□□□ 0.73
TRIM54-202ENST00000380075 ADAM18Q9Y3Q7 739 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 A0A1W2PQD3 144 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 A8MUA0 341 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 LRRN3E7EW58 273 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 TFP02787 698 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 SLC2A2P11168 524 aaPredicted RBP19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CCR4P51679 360 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CFHR1Q03591 330 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 RSPO4Q2I0M5 234 aaPredicted RBP19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CCDC58Q4VC31 144 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 HLA-DQA1Q5Y7H0 255 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 WDR74Q6RFH5 385 aaPredicted RBP19.63■□□□□ 0.73
TRIM54-202ENST00000380075 SPATC1Q76KD6 591 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CEACAM19Q7Z692 300 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 Q8N402 240 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 C19orf18Q8NEA5 215 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.63■□□□□ 0.73
TRIM54-202ENST00000380075 LRRN3Q9H3W5 708 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 NANSQ9NR45 359 aa19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CDV3Q9UKY7 258 aaKnown RBP19.63■□□□□ 0.73
TRIM54-202ENST00000380075 CEP250Q9BV73 2442 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 A0A1B0GX78 115 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 OR6C76A6NM76 312 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 CD14P08571 375 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 SPI1P17947 270 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 SHC1P29353 583 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 IL12BP29460 328 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 SLC25A1P53007 311 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 EBPQ15125 230 aaKnown RBP19.62■□□□□ 0.73
TRIM54-202ENST00000380075 NR0B2Q15466 257 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 TAB1Q15750 504 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 SSX6Q7RTT6 188 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 LRRC28Q86X40 367 aaPredicted RBP19.62■□□□□ 0.73
TRIM54-202ENST00000380075 EGFL6Q8IUX8 553 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 C17orf47Q8NEP4 570 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 OR5J2Q8NH18 312 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 SMIM19Q96E16 107 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 NMNAT3Q96T66 252 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 MMP25Q9NPA2 562 aa19.62■□□□□ 0.73
TRIM54-202ENST00000380075 TRAV1-2A0A0B4J238 106 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 GLCEO94923 617 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 APEX1P27695 318 aaKnown RBP19.61■□□□□ 0.73
TRIM54-202ENST00000380075 HTR3AP46098 478 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 IL18Q14116 193 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 CDK5R1Q15078 307 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 ACSM3Q53FZ2 586 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 IDNKQ5T6J7 187 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 GUSBP11Q6P575 273 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 RPL22L1Q6P5R6 122 aaKnown RBP19.61■□□□□ 0.73
TRIM54-202ENST00000380075 GHSRQ92847 366 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 NEDD4LQ96PU5 975 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 NUDT9Q9BW91 350 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 MFRPQ9BY79 579 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 COPS7AQ9UBW8 275 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 MOKQ9UQ07 419 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 CPED1A4D0V7 1026 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 OIP5O43482 229 aa19.61■□□□□ 0.73
TRIM54-202ENST00000380075 EIF4E2O60573 245 aaKnown RBP19.61■□□□□ 0.73
TRIM54-202ENST00000380075 TXNDC12O95881 172 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 584.4 ms