RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ZNF311Q5JNZ3 666 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 ATAD3CQ5T2N8 411 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 SLC7A5P1Q8MH63 180 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 ZNF485Q8NCK3 441 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 OR52N1Q8NH53 320 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 ACOT11Q8WXI4 607 aaPredicted RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 TM9SF4Q92544 642 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 TP53INP1Q96A56 240 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 CNRIP1Q96F85 164 aaPredicted RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 OR7D2Q96RA2 312 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.27□□□□□ -0.61
VRK3-202ENST00000377011 SLC38A1Q9H2H9 487 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 TPK1Q9H3S4 243 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 C14orf119Q9NWQ9 140 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 PLEKHB1Q9UF11 243 aaPredicted RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 MRPS33Q9Y291 106 aaKnown RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 EXOGQ9Y2C4 368 aaKnown RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 RBMX2Q9Y388 322 aaKnown RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 WWP2O00308 870 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 HLA-DQB1P01920 261 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 SDC2P34741 201 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 OMPP47874 163 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 RFX2P48378 723 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 BDH1Q02338 343 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 HNRNPA0Q13151 305 aaKnown RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 OR1C1Q15619 314 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 CARTPTQ16568 116 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ZFP69Q49AA0 526 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 THOC7Q6I9Y2 204 aaKnown RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 HEPHL1Q6MZM0 1159 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 PAQR6Q6TCH4 344 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ZNF730Q6ZMV8 503 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 MDGA2Q7Z553 956 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 NRARPQ7Z6K4 114 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 C9orf40Q8IXQ3 194 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 LILRB4Q8NHJ6 448 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ADAMTS18Q8TE60 1221 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ELP4Q96EB1 424 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ZNF681Q96N22 645 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 GPA33Q99795 319 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 DEFB126Q9BYW3 111 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 MIXL1Q9H2W2 232 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 CACYBPQ9HB71 228 aaKnown RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 ASB6Q9NWX5 421 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ZNF780BQ9Y6R6 833 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 FABP12A6NFH5 140 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 KLF4O43474 513 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 TRIM3O75382 744 aaPredicted RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 ERAL1O75616 437 aaKnown RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 GPR75O95800 540 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 IGHA1P01876 353 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 IGKV3-11P04433 115 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 HMGN1P05114 100 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 DUSP8Q13202 625 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 RIN1Q13671 783 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 EIPR1Q53HC9 387 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 RNFT1Q5M7Z0 435 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 PDZK1Q5T2W1 519 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 AADACL4Q5VUY2 407 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ZNF324BQ6AW86 544 aaPredicted RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 RRM2BQ7LG56 351 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 BCDIN3DQ7Z5W3 292 aaKnown RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 RDH10Q8IZV5 341 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ARMC10Q8N2F6 343 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 PSD4Q8NDX1 1056 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 NUP43Q8NFH3 380 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 SENP5Q96HI0 755 aaPredicted RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 PLA2G12AQ9BZM1 189 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 RNF32Q9H0A6 362 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
VRK3-202ENST00000377011 SLA2Q9H6Q3 261 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 EVA1AQ9H8M9 152 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 ABCB9Q9NP78 766 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 IL20Q9NYY1 176 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 PHF11Q9UIL8 331 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 CLCA3PQ9Y6N3 262 aa11.26□□□□□ -0.61
VRK3-202ENST00000377011 A0A0G2JMM0 328 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 A0A1W2PPB8 328 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 A0A1W2PQ09 198 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 A0A1W2PRS3 328 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 CCDC182A6NF36 153 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 KIR3DP1A8MWS1 328 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 AP3D1O14617 1153 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 SCO2O43819 266 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 PRAMEF2O60811 474 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 ITGA10O75578 1167 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 OR2J2O76002 312 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 HLA-DPB1P04440 258 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 IFI6P09912 130 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 LIMS3P0CW19 117 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 LIMS4P0CW20 117 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 HTR1FP30939 366 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 SSTR4P31391 388 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 RFC3P40938 356 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 SLC1A3P43003 542 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms