RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SLC19A2O60779 497 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 LCN1P31025 176 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 P2RY14Q15391 338 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 ZNF517Q6ZMY9 492 aaPredicted RBP18.42■□□□□ 0.54
VSX1-202ENST00000376709 SHISA6Q6ZSJ9 500 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 MARCH3Q86UD3 253 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 LIPHQ8WWY8 451 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 PELI1Q96FA3 418 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 DEPDC7Q96QD5 511 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 DDOQ99489 341 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 KLHDC3Q9BQ90 382 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 NMNAT2Q9BZQ4 307 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 RPRD1BQ9NQG5 326 aaKnown RBP18.42■□□□□ 0.54
VSX1-202ENST00000376709 FSCN3Q9NQT6 498 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 ST6GALNAC2Q9UJ37 374 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 AGRPO00253 132 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 CD14P08571 375 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 RGS19P49795 217 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 CTXN1P60606 82 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 ACSM3Q53FZ2 586 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 TRIQKQ629K1 86 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 POMZP3Q6PJE2 187 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 LANCL3Q6ZV70 420 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 OMA1Q96E52 524 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 KTI12Q96EK9 354 aaPredicted RBP18.42■□□□□ 0.54
VSX1-202ENST00000376709 MRPL48Q96GC5 212 aaKnown RBP18.42■□□□□ 0.54
VSX1-202ENST00000376709 PPP1R3EQ9H7J1 279 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 ADAMTS20P59510 1910 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 CACNA1EQ15878 2313 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SC5DO75845 299 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 F13BP05160 661 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 ASAH2BP0C7U1 165 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 ABCD3P28288 659 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 CDONQ4KMG0 1287 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 AGAP6Q5VW22 663 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 NANOGNBQ7Z5D8 188 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 PXKQ7Z7A4 578 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 TPRA1Q86W33 373 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 LSM14AQ8ND56 463 aaKnown RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 OR13C5Q8NGS8 318 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SMIM19Q96E16 107 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 AGAP4Q96P64 663 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 LPAR4Q99677 370 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 MUC3AQ02505 3323 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 FAM171A2A8MVW0 826 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 KHNYNO15037 678 aaKnown RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 TSPAN2O60636 221 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SERPINA3P01011 423 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 CXCR1P25024 350 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SDHAP31040 664 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 CDKN2AP42771 156 aaKnown RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 RPS5P46782 204 aaKnown RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 GDI2P50395 445 aaKnown RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 SIRPAP78324 504 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 IL10RAQ13651 578 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 CDK5R1Q15078 307 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SFXN4Q6P4A7 337 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 RAB43Q86YS6 212 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 C19orf18Q8NEA5 215 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 THAP4Q8WY91 577 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SOSTQ9BQB4 213 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 C11orf54Q9H0W9 315 aaPredicted RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 ATXN7L1Q9ULK2 861 aaPredicted RBP18.41■□□□□ 0.54
VSX1-202ENST00000376709 SRPK3Q9UPE1 567 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 SLC6A5Q9Y345 797 aa18.41■□□□□ 0.54
VSX1-202ENST00000376709 C4orf47A7E2U8 309 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 C17orf51A8MQB3 221 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 ALG1L2C9J202 215 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 TO15178 435 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 CPNE3O75131 537 aaKnown RBP18.4■□□□□ 0.54
VSX1-202ENST00000376709 GLCEO94923 617 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 HIST1H2ABP04908 130 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 PTBP1P26599 531 aaKnown RBP eCLIP18.4■□□□□ 0.54
VSX1-202ENST00000376709 OR10A3P58181 314 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 LTBQ06643 244 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 LYPD4Q6UWN0 246 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 HIST3H2AQ7L7L0 130 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 FAM122BQ7Z309 247 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 HIST1H2ACQ93077 130 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 ALG12Q9BV10 488 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 ADAM19Q9H013 955 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 C12orf10Q9HB07 376 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 ACOXLQ9NUZ1 547 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 NCDNQ9UBB6 729 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 GRHPRQ9UBQ7 328 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 COPS3Q9UNS2 423 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 TRBV2A0A0J9YWF9 115 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 A0A1W2PQD3 144 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 TFECO14948 347 aaPredicted RBP18.4■□□□□ 0.54
VSX1-202ENST00000376709 SEC14L5O43304 696 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 APEHP13798 732 aaKnown RBP18.4■□□□□ 0.54
VSX1-202ENST00000376709 ELK1P19419 428 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 GRPRP30550 384 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 UQCRC1P31930 480 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 RPL18Q07020 188 aaKnown RBP18.4■□□□□ 0.54
VSX1-202ENST00000376709 TOMM34Q15785 309 aaPredicted RBP18.4■□□□□ 0.54
VSX1-202ENST00000376709 LRRC75AQ8NAA5 344 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 CHAC2Q8WUX2 184 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 TAAR8Q969N4 342 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 KCTD12Q96CX2 325 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms