RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 FOXN4Q96NZ1 517 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 ALKBH3Q96Q83 286 aaPredicted RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 TAPBPLQ9BX59 468 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 SEC61A2Q9H9S3 476 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 CA10Q9NS85 328 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 CRNNQ9UBG3 495 aaPredicted RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 NOL12Q9UGY1 213 aaKnown RBP eCLIP13□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 V9GYY5 206 aaPredicted RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 TMEM229AB2RXF0 380 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 RFXANKO14593 260 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 KRT33AO76009 404 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 BCHEP06276 602 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 CECR9P0C854 216 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 CALCRP30988 508 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 SERPINF1P36955 418 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 SNRPD2P62316 118 aaKnown RBP12.99□□□□□ -0.33
CLCN6-204ENST00000376491 NAAAQ02083 359 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 LRRC74AQ0VAA2 488 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 ADIPOQQ15848 244 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 C1orf140Q5VVS0 124 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 NIPAL3Q6P499 406 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 ANKRD16Q6P6B7 361 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 ABHD12BQ7Z5M8 362 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-204ENST00000376491 SERPINA11Q86U17 422 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 KDM8Q8N371 416 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 SLC38A5Q8WUX1 472 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 C3orf49Q96BT1 292 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 MSI2Q96DH6 328 aaKnown RBP12.99□□□□□ -0.33
CLCN6-204ENST00000376491 KATNB1Q9BVA0 655 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 CHODLQ9H9P2 273 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 KCNK9Q9NPC2 374 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 P2RX2Q9UBL9 471 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 SVEP1Q4LDE5 3571 aa12.99□□□□□ -0.33
CLCN6-204ENST00000376491 A0A096LPE4 126 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 ARPC4-TTLL3A0A0A6YYG9 625 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 A0A1W2PPZ6 126 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 FTCDNL1E5RQL4 147 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF587BE7ETH6 402 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 NDUFS8O00217 210 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 VAMP5O95183 116 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 IGLV1-44P01699 117 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 CRATP43155 626 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 CRISP3P54108 245 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
CLCN6-204ENST00000376491 DSTNP60981 165 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 COPZ1P61923 177 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 EGR4Q05215 589 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 RNF220Q5VTB9 566 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PRAMEF8Q5VWM4 474 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PRAMEF7Q5VXH5 474 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 FAM166AQ6J272 317 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 VHLLQ6RSH7 139 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 MYPOPQ86VE0 399 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-204ENST00000376491 GLB1L3Q8NCI6 653 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-204ENST00000376491 MAGEE2Q8TD90 523 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-204ENST00000376491 TMEM19Q96HH6 336 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 ZBTB18Q99592 522 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 VRK1Q99986 396 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PAIP2Q9BPZ3 127 aaKnown RBP12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 SOX7Q9BT81 388 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PTDSS2Q9BVG9 487 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 LINC00470Q9BZP3 86 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PLK3Q9H4B4 646 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 TPT1P8Q9HAU6 139 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 CALML5Q9NZT1 146 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 PRDM4Q9UKN5 801 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 KCNS2Q9ULS6 477 aa12.98□□□□□ -0.33
CLCN6-204ENST00000376491 LOC100289279A0A1B0GTE1 492 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 LOC390937A0A1W2PQ73 354 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 B9A039 149 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 HDAC3O15379 428 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 SNNO75324 88 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-204ENST00000376491 PDE5AO76074 875 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF432O94892 652 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 CRYAAP02489 173 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 IL6P05231 212 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 CELA3BP08861 270 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 OR4A8P0C604 315 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 ZCCHC18P0CG32 403 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 KITP10721 976 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 PNMTP11086 282 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 APEHP13798 732 aaKnown RBP12.97□□□□□ -0.33
CLCN6-204ENST00000376491 THBS2P35442 1172 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 UBE2NP61088 152 aaKnown RBP12.97□□□□□ -0.33
CLCN6-204ENST00000376491 HOXC5Q00444 222 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 HGFACQ04756 655 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 LARS2Q15031 903 aaKnown RBP12.97□□□□□ -0.33
CLCN6-204ENST00000376491 EFNB3Q15768 340 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 CARTPTQ16568 116 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 PDCD4Q53EL6 469 aaKnown RBP12.97□□□□□ -0.33
CLCN6-204ENST00000376491 CEP85LQ5SZL2 805 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 FAM120AOSQ5T036 256 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 SLC46A3Q7Z3Q1 461 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 MFSD8Q8NHS3 518 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms