RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PSMB1P20618 241 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 IGFBP4P22692 258 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CFL1P23528 166 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NDUFS1P28331 727 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 FXYD6P3P58550 94 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 HHEXQ03014 270 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR10K2Q6IF99 312 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 KIAA0907Q7Z7F0 614 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NR2C2APQ86WQ0 139 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 MNTQ99583 582 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF471Q9BX82 626 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CMC2Q9NRP2 79 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CYSLTR2Q9NS75 346 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 MYO15AQ9UKN7 3530 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SIGLEC5O15389 551 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 LILRB3O75022 631 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PEX14O75381 377 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 GNRH1P01148 92 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TACSTD2P09758 323 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SIGLEC14Q08ET2 396 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ALG10Q5BKT4 473 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 FBXO42Q6P3S6 717 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CREB3L2Q70SY1 520 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PLPP7Q8NBV4 271 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR2T4Q8NH00 348 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SFXN2Q96NB2 322 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 C19orf43Q9BQ61 176 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NT5DC2Q9H857 520 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SEC61A2Q9H9S3 476 aa13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SF3B6Q9Y3B4 125 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TCRBV21S2A2A0A5A6 115 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 C5orf51A6NDU8 294 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 C2orf74A8MZ97 194 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 UBL3O95164 117 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZGLP1P0C6A0 271 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SRMP19623 302 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 IL12BP29460 328 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 HTR4Q13639 388 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 KLHL26Q53HC5 615 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SMUG1Q53HV7 270 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TMEM52Q8NDY8 209 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 THAP10Q9P2Z0 257 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 RENP00797 406 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NRG3P56975 720 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OPCMLQ14982 345 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ARHGAP40Q5TG30 622 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SLC22A10Q63ZE4 541 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR4C3Q8NH37 302 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 KIAA1143Q96AT1 154 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PELI1Q96FA3 418 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NCDNQ9UBB6 729 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PLXND1Q9Y4D7 1925 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 GPR171O14626 319 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 AKR1C2P52895 323 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 GUCA2AQ02747 115 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 AKR1C1Q04828 323 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 DUSP6Q16828 381 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 RELL2Q8NC24 303 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CPNE7Q9UBL6 633 aa13.23□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CACNA1EQ15878 2313 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 M0QYG6 137 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZIC2O95409 532 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 EPXP11678 715 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SORDQ00796 357 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SPOCK1Q08629 439 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NHLRC1Q6VVB1 395 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 C3P1Q6ZMU1 363 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CRIPAKQ8N1N5 446 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR11H4Q8NGC9 324 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SLC6A7Q99884 636 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ERVMER34-1Q9H9K5 563 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 MED11Q9P086 117 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CKLFQ9UBR5 152 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SIGLEC7Q9Y286 467 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 EEF1E1-BLOC1S5C9J1V9 151 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 THY1P04216 161 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 IFNA6P05013 189 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 AKT2P31751 481 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SELENOPP49908 381 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ACTA2P62736 377 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ACTG2P63267 376 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PRAMEF17Q5VTA0 474 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF227Q86WZ6 799 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 BRIX1Q8TDN6 353 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 FGF14Q92915 247 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR2M2Q96R28 347 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 GPER1Q99527 375 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 PLA2G2FQ9BZM2 168 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms