RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 RBPMSQ93062 196 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 ART5Q96L15 291 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 ZNF578Q96N58 590 aaPredicted RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 TIMP4Q99727 224 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 ATF6BQ99941 703 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 RPS6KB2Q9UBS0 482 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 MRPS17Q9Y2R5 130 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 RNF215Q9Y6U7 377 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 FITM1A5D6W6 292 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 SERINC4A6NH21 518 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 H0YIG0 161 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 CSTAP01040 98 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 CLUP10909 449 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 PSMD4P55036 377 aaKnown RBP12.8□□□□□ -0.36
MSH5-202ENST00000375740 GRM7Q14831 915 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ARIH2OSQ8N7S6 290 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 CYB561A3Q8NBI2 242 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ST8SIA4Q92187 359 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 WBP1Q96G27 269 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ZDHHC12Q96GR4 267 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 LMF1Q96S06 567 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ALG8Q9BVK2 526 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ZC4H2Q9NQZ6 224 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 SLC35A3Q9Y2D2 325 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 DAPL1A0PJW8 107 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 RIIAD1A6NNX1 92 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 C17orf105B2RV13 164 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 SERPINI2O75830 405 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 TOXO94900 526 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 IL9P15248 144 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 HK1P19367 917 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 OR1D4P47884 311 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 OR1D5P58170 312 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 PPP3R1P63098 170 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 SERTAD2Q14140 314 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 CRMP1Q14194 572 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 VASNQ6EMK4 673 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 TTLL10Q6ZVT0 673 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ZNF321PQ8N8H1 164 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 OR10H4Q8NGA5 316 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 C1orf216Q8TAB5 229 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.8□□□□□ -0.36
MSH5-202ENST00000375740 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 BABAM2Q9NXR7 383 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 EPHA6Q9UF33 1036 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 FBXL4Q9UKA2 621 aa12.8□□□□□ -0.36
MSH5-202ENST00000375740 GABRPO00591 440 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 HLA-DPB1P04440 258 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 MRPL3P09001 348 aaKnown RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 PEPDP12955 493 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 SLC6A1P30531 599 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 SRP9P49458 86 aaKnown RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 ZSWIM7Q19AV6 140 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 PLA1AQ53H76 456 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 ADGRG3Q86Y34 549 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 MARCH9Q86YJ5 346 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 CMIPQ8IY22 773 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 ZSCAN1Q8NBB4 408 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 RAB33BQ9H082 229 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 HDHD2Q9H0R4 259 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 PNO1Q9NRX1 252 aaKnown RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 LANCL2Q9NS86 450 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 SIRT4Q9Y6E7 314 aaPredicted RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 CD8B2A6NJW9 211 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 CD8BP10966 210 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 SLC6A6P31641 620 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 PUDPQ08623 228 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 IKZF1Q13422 519 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 MS4A15Q8N5U1 240 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 OR5M3Q8NGP4 307 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 SMAP2Q8WU79 429 aaPredicted RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 HSD17B8Q92506 261 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 AHCYL2Q96HN2 611 aaKnown RBP12.79□□□□□ -0.36
MSH5-202ENST00000375740 CHRNA10Q9GZZ6 450 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 GHITMQ9H3K2 345 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 CUTCQ9NTM9 273 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 ASB6Q9NWX5 421 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 PRODH2Q9UF12 536 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 BAIAP2Q9UQB8 552 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
MSH5-202ENST00000375740 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 LRRN3E7EW58 273 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 PIAS2O75928 621 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 GYPBP06028 91 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 SLC2A5P22732 501 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 GALNSP34059 522 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 BTCP35070 178 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms